KEGG   Nitrosococcus wardiae: E3U44_18365
Entry
E3U44_18365       CDS       T05933                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
nwr  Nitrosococcus wardiae
Brite
KEGG Orthology (KO) [BR:nwr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:nwr02048]
    E3U44_18365
Enzymes [BR:nwr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     E3U44_18365
Prokaryotic defense system [BR:nwr02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   E3U44_18365
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII T1RH-like_C DEAD DUF5955 DUF5600
Other DBs
NCBI-ProteinID: QBQ56245
UniProt: A0A4V1AWD4
LinkDB
Position
complement(3874990..3878058)
AA seq 1022 aa
MSTVGQKERQTQARVIQFFREQLGYDFLGNWSEREGNRNIEEGLLRPWLAKRGVSNALIT
RALHQLGKATALGEGKHLYDANRAVYDLLRYGVKVKEGVGEHHQTVWLIDWNHPEHNHFA
IAEEVSIRGEHTKRPDIVLYVNGIALGVLELKRSTVAVSEGIRQNLDNQKKAFIRGFFTT
LQLLMAGNETEGLRYGTIETPEKHYLSWKEESDIENALDRPLLQLCNKPRLLELIHDFMV
FDAGVKKTCRHNQYFGVKAAQQSVRNRQGGIIWHTQGSGKSLTMVWLTKWIREHIADARV
LIITDRTELDEQIEGVFLGVNEAIYRTQSGADLMAQLNATTPWLLCSLIHKFGASEETAT
EAFIEELKASLPSDFQAKGQIFVFVDECHRTQSGKLHRAMKALLPHALFIGFTGTPLLKA
DKQKSIEVFGPYLHTYKFDEAVRDGVVLDLRYEARDIDQNLTSPQRVDQWFEAKTRGLSD
LARVQLKRKWGTLQKVLSSQSRLEKIVADILFDMETRDRLMSGRGNALLVSSSIYQACKL
YELFAQTPLAGQCAIITSYKPSPNDIKGEESGEGLTEKLRQYDIYRKMLADWFEEPEDQA
MTRTEEFETAVKEKFVKAPGQMKLLIVVDKLLTGFDAPSATYLYIDKKMQDHGLFQAICR
VNRLDGEDKEYGYIIDYKDLFKSLEGAIGDYTGGALEGYDRADVAGLLENRLEKGRERLE
EAREAVKALCEPVAPPKDTGAYLHYFCAADTLDQAALKDNEPKRIALYKAVSALVRAFAN
LANEMPDAGYRNTEIEAIRQEVGHYEKVRHEVKLGSGDYVDMKVFEPAMRHLLDTYLQAE
DSEVISAFDDLGLVELIVEQGLGALDKLPKGIRDNPEAMAETIEHNVRKLIIDEQPVNPK
YYEKMSHLLDALIQERKAQALAYQEYLKKLVELSGKVKKPTATTAYPTSLNTPARRALYD
NLDYNEALAVKIDTAVRYTKKDDWRGNRFKEREVENAIREELGEYAVKTPEIFELVKNQR
EY
NT seq 3069 nt   +upstreamnt  +downstreamnt
atgagcaccgtcggccaaaaagaacgccaaacccaagcgcgggtcatccagttcttccgg
gagcaactgggctacgattttctcggcaattggagcgagcgggaaggcaatcgcaatatc
gaagagggcctgctgcggccctggctggccaagcggggagtctccaacgcccttatcacc
cgcgccctccatcagctcggcaaagccaccgccttgggggagggaaaacacctctatgac
gccaaccgggccgtgtatgacctgctgcgctacggggtgaaggtcaaggaaggggtgggg
gagcaccaccagaccgtgtggctcattgactggaaccacccggagcacaaccacttcgct
attgccgaagaagtctctatccggggcgagcataccaagcgtcccgacatcgtgctctat
gtcaacgggattgccctgggggtgctggagctgaaacgctccacggtcgcggtgagcgag
ggcatccgccagaatctggataaccagaaaaaagcgttcattcgcggtttttttaccacc
ctgcaactgctcatggcgggcaatgagactgaggggctgcgctacggcaccatcgagacg
ccggaaaaacattacctgagctggaaagaagagagcgacattgagaacgccctggaccgg
ccgttgcttcaactttgcaacaagccccgtttgctagaactcatccatgacttcatggtc
tttgacgccggggtcaagaagacttgccgccacaatcagtacttcggggtcaaggcggcc
cagcagagtgtccgcaaccggcagggggggatcatttggcatacccaaggctccggcaaa
tcgctgaccatggtgtggctcaccaaatggatacgggagcatatagcagatgcccgggtg
ctcatcatcaccgaccgcaccgaactggatgagcagatcgagggggtgttcctgggagtg
aacgaggctatctaccgcacccaaagcggcgccgatctgatggcccaactcaatgccacc
acgccctggttgctatgctccctcatccataagttcggcgccagtgaagagacggccacc
gaggcctttatcgaggaattgaaagcgagcttgccctctgatttccaagccaagggccag
atcttcgtattcgtggacgagtgtcatcgcacccagtccggtaaacttcatcgggccatg
aaggccctgctgccccatgccctgttcatcggttttaccggcacccccttgttaaaagcc
gataagcaaaaaagtatcgaggtcttcggcccttacctccatacctacaagtttgacgag
gcggtgcgcgacggcgtggtgctggacttacgctatgaggcccgagatatcgatcagaac
ttgacctcgccccagcgggtggaccagtggtttgaggccaagactcgggggctctcggat
ctggcccgggtccagctcaagcggaaatggggcaccctgcaaaaggtgctcagctcccag
tcccgcctggagaagattgtggccgacatcctcttcgacatggagacccgggaccggttg
atgagcggccggggcaatgccctgctagtctccagcagcatttaccaggcctgcaagctc
tatgaattgttcgcccagactcccttggcgggacaatgcgccattatcaccagctataag
ccttcgcctaacgatatcaagggcgaggagagcggcgaggggctaacggagaaactgcgc
cagtatgacatctaccgaaaaatgctggccgattggttcgaggagcccgaagaccaggcc
atgactcggacggaagaatttgaaacagcagtcaaggaaaaattcgtcaaagcgccgggg
cagatgaagctccttatcgtggtggacaagctcttgaccggcttcgacgccccctcggcc
acctatctttatatcgacaaaaagatgcaggaccatggcctgttccaggccatctgccgg
gtgaaccggctggatggggaggacaaggaatacggctatatcatcgactacaaggacctg
ttcaagtccctggagggggccattggcgactacaccggcggcgccctggagggctatgac
cgggcggatgtggcgggcctgctggaaaatcgcctggagaaggggcgggaacgactagaa
gaagcccgggaggcggttaaggccctttgtgaaccggtagcgcctcccaaagacacgggg
gcttatctgcattatttctgcgccgctgatactcttgaccaggcggccctcaaggacaac
gagcccaagcggatcgccctctacaaagccgtatctgctctggtgcgggcctttgccaat
ctggccaatgagatgccggacgcaggttaccgcaatactgaaatcgaggccattcggcaa
gaggtgggccactacgagaaagtccgccatgaggtgaagcttggcagcggcgactacgtg
gacatgaaagtattcgagcccgccatgcgccatctgctggatacctatctccaggccgag
gacagtgaagtgatttccgctttcgatgatctgggcctggtggagctgattgtggagcag
gggctaggggccttggataagctgcccaaagggattcgcgacaaccccgaggccatggcc
gaaaccatcgagcacaacgtgcgcaagttgattatcgatgagcagccggtgaatcccaaa
tattacgagaaaatgtcccacttgctggatgccttgattcaggagcgcaaggcccaggcg
ttggcataccaggaatatcttaaaaagctggtggaactgtccggcaaagtgaaaaagcct
accgcgactaccgcctatcccacctccctgaacaccccggccaggcgggccctttacgat
aatcttgactacaatgaggcattggcggtcaagatcgacactgcggtgcgctacactaag
aaggacgactggcggggcaaccgcttcaaggagcgggaagtggaaaacgctattcgggaa
gaactcggcgagtatgcagtgaaaacacccgagatctttgagctagtgaaaaatcagcgt
gaatactaa

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