KEGG   Nitrosococcus wardiae: E3U44_18475
Entry
E3U44_18475       CDS       T05933                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
nwr  Nitrosococcus wardiae
Pathway
nwr02024  Quorum sensing
nwr03060  Protein export
nwr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nwr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    E3U44_18475
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E3U44_18475
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    E3U44_18475
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nwr02044]
    E3U44_18475
Enzymes [BR:nwr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     E3U44_18475
Secretion system [BR:nwr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   E3U44_18475
  Eukaryotic Sec-SRP protein
   E3U44_18475
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin CbiA cobW YqeC AAA_33 KTI12 Thymidylate_kin ABC_tran NACHT AAA_16 T2SSE AAA_31 AAA_24 APS_kinase DnaB_C Helicase_RecD AAA_19 AAA_14 nSTAND3 ATP_bind_1 DO-GTPase1 ArsA_ATPase AAA_30 AAA_28 FliD_C TsaE MobB KAP_NTPase NTPase_1 SLFN-g3_helicase PRP9_N
Other DBs
NCBI-ProteinID: QBQ56261
UniProt: A0A4P7C1K6
LinkDB
Position
complement(3894473..3895831)
AA seq 452 aa
MFDNLTERLGQTLKRLRGQARLTEDNIKDTLREVRVALLEADVALPVVRDFVAKVRERAI
GQEVLRSLTPGQVFIKIVHEELMAVMGEAAEGLNLDVRPPAVILMAGLQGSGKTTSVAKL
ARWLKERQKKSVLVTSADVYRPAAIQQLETLAKEVEVEFYPSEASQDPAIIAQRALQQAR
TRLFDVLIIDTAGRLHVDDQMMAEIKRLHGAVEPVETLFVVDSMTGQDAANTARAFNDSL
ALTGVILTKVDGDARGGAALSIRQITGKPIKFLGVGEKTVALELFHPDRLASRILGMGDV
LSLVEEVEEKLDKDKAEKFAKKLKKGKGFDLEDFRQQLQQMSKMGGISSLLDKLPGVNLP
AGAAEQVNDRDLARLEAIINSMTPKERQRPEIIKSSRKRRIAAGSGTQVQEVNRLLKQFT
QMQKMMKQMSRKGGMAKLMRGMKGGMPPGMPF
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgtttgataacttgacggagcgtcttggccaaactctgaaacggttacgaggccaggcg
cgcctcaccgaagacaatatcaaagacaccctacgtgaggtgcgcgttgctttactggag
gcggacgtcgctttacccgtggtgcgggattttgtcgctaaggttcgggaacgggcgatt
ggacaggaggttctgcgcagcctgacaccgggccaggtatttatcaagatcgtccatgaa
gaactgatggcggtcatgggggaggctgcagaaggcctgaatctggatgttcgtcctcct
gccgttatcttaatggcgggtttgcaggggtcggggaaaacgaccagcgtagccaagctt
gcccggtggctgaaggagcggcaaaagaagtcggtgctggtgactagtgctgatgtctat
cggccagcagcgattcagcagcttgagaccctagccaaggaagtggaggtggaattttac
cctagcgaagctagccaagacccagccattattgcccagcgtgcgcttcaacaggctcgt
actcggttgtttgatgtgctcattatcgatacggcgggtcgtctccatgtggatgatcag
atgatggcagagatcaagcgtttacacggggcagtagagccggttgagacactctttgtg
gtggatagtatgaccgggcaggatgcggccaatacggctcgggctttcaatgattccctg
gcgctaacgggcgttattctcaccaaggtcgatggtgatgcccgcgggggggcggcttta
tctatccgccaaattaccggcaaacctatcaaatttttaggggtaggggagaaaacggtt
gcccttgagctctttcatccggaccgcttggcttcccgcatcttgggtatgggggatgtc
ctcagcttggtggaagaggtagaggagaagcttgataaagataaggcggagaaatttgcc
aaaaagctgaagaagggtaaaggctttgatctcgaggatttccgtcaacagttacagcaa
atgagtaaaatgggtggaatttccagtttattggataaactccccggagttaatttacct
gcaggtgccgctgaacaagttaatgatcgggatctggcccgtctggaggcgattattaat
tccatgaccccaaaggagcgtcaacggccagagattattaaaagctctcgtaaacgccgt
attgcagctggttcgggtacccaagtccaagaagtcaaccgtttactcaagcagtttact
cagatgcaaaaaatgatgaagcagatgtcccgtaaaggagggatggctaagttaatgcgg
gggatgaaaggagggatgccgccagggatgcccttttga

DBGET integrated database retrieval system