Nitrospina watsonii: NSPWAT_0712
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Entry
NSPWAT_0712 CDS
T08754
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nwt
Nitrospina watsonii
Pathway
nwt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NSPWAT_0712 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwt03019
]
NSPWAT_0712 (rhlE)
Enzymes [BR:
nwt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NSPWAT_0712 (rhlE)
Messenger RNA biogenesis [BR:
nwt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NSPWAT_0712 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Utp25_C
Cas3-like_C_2
CMS1
YbbR
Phage_integrase
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
CAI2717571
LinkDB
All DBs
Position
NSPWAT:764530..765819
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AA seq
429 aa
AA seq
DB search
MTCPPTEGFAALNLIDPILRAIEEEKYTTPTPIQTEAIPHLLDGRDLLGCAQTGTGKTAA
FALPVLQRLAESKTVAGPKGVRALVLAPTRELAVQIDESFRVYGRHLKMTQALVYGGVKA
FHQIRALKQGVDVLVATPGRLLDLLQQRCLRLDKVEIFVLDEADRMLDMGFLPDVRRIHS
ALPENRQTMLFSATLPEEIRRLIRTFLVDPVQVTVSPPSSTVKNIDQKILFVDKENKKAL
LESVLANDEVKRVLIFTRTKHGANQVAKSLNRTRIRAEAIHGNKSQPARLQALEKFRSGK
TRVLVATDIVSRGLDVDGITHVINYELPKEAESYVHRIGRTARAGALGVAISFCDAGERS
YLRRIEREINHVVNVDTAHPYHSSNVAASGGRRNGENGGKGPRRDSNGMRPRTYGGRKKP
FRSRSSRVR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgacctgccctccgaccgagggctttgccgcgttgaacctgatcgacccgatcctccgc
gccatcgaagaagaaaagtacaccacgccgaccccgattcagacggaagccatcccgcac
ctgctggacggccgcgacctgctgggctgcgcccagaccggcaccggcaaaacggcggcg
ttcgcgttgcctgtgttgcagcggctggcggaatccaaaaccgttgccggccccaagggt
gtgcgggcgctggttctggccccgacccgcgagttggcggtgcagatcgacgagagcttt
cgtgtttacggacgccacctgaaaatgacgcaggcgctggtgtatggcggcgtcaaggcc
ttccatcagatccgcgccttgaaacagggtgtcgatgtgctggtggccacgccgggacgc
ctgctcgatttgctccagcagcgttgcctgcgcctggacaaagtggaaatcttcgtcctg
gacgaggccgaccgcatgctggacatgggctttttgcccgatgtgcgccgcatccattcg
gctcttccggaaaaccggcagaccatgctattttccgcgaccctgccggaagaaatccgt
cgcctcatccgcacctttctggtggacccggttcaggtgacggtatcgccgccgtcgagc
acggtgaaaaacatcgaccagaaaatcctgttcgtggacaaggaaaacaaaaaggcgttg
ctggaatcggtgctggcgaatgacgaggtgaaacgcgttctgattttcacccgcaccaag
cacggcgccaaccaggtcgccaaaagcctgaaccggacgcgcatccgcgccgaagccatt
cacggcaacaaatcgcagcccgcgcgcttgcaggcgttggagaaatttcgttccggcaaa
acgcgggtgctggtcgccaccgacatcgtttcccgcgggctggatgtcgatggcatcacc
cacgtgatcaattacgaactgcccaaggaagcggaaagctacgtccatcgcatcggacgc
acggcccgtgccggggcgctgggtgtggccatttctttctgcgatgccggggagcggtcg
tatcttcggagaatcgaaagagagatcaaccacgtggtgaatgtggatacggcgcatccc
taccattcgtccaatgtggcggcctcgggtgggcggcgcaacggggaaaatggcggaaaa
ggcccgcggcgcgattccaatggaatgcgcccccggacctacggcgggcggaaaaagccg
ttccgttcccgctcttcccgcgtgagataa
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