Nitrospina watsonii: NSPWAT_1001
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Entry
NSPWAT_1001 CDS
T08754
Name
(GenBank) MiaB family protein, possibly involved in tRNA or rRNA modification
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
nwt
Nitrospina watsonii
Brite
KEGG Orthology (KO) [BR:
nwt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwt03016
]
NSPWAT_1001
Enzymes [BR:
nwt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
NSPWAT_1001
Transfer RNA biogenesis [BR:
nwt03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
NSPWAT_1001
Prokaryotic type
Methylthiotransferases
NSPWAT_1001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
CAI2717860
UniProt:
A0ABM9HCH5
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All DBs
Position
NSPWAT:complement(1061729..1063051)
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AA seq
440 aa
AA seq
DB search
MKVAFSTLGCRTNQNDTAEMQTLLENEGFTIVDANHPADIYVINSCTVTAKSDASSRQAV
KRSLAINEDAMVVFTGCYAQNNPEEVRQISGLDVLLGNANKLEILAAIRRRLEHLQSRDV
FGDPEVVMTDITKSWDFKTIPVTEFGGKSKAFIKVQTGCDESCTFCTVARARGRSISDER
ENILNNVRCSLDAGFKEITLTGINLGTYGMDKSPPETFSSLVEDIANLDGDFRLRISSIN
PMEIDDHLIDLMAERDNICPHFHIPLQSGDDTVLAGMKRNYDSGNYRTVVERAAERIDHL
GLGADVIVGFPGETDAMYENTYRLVEELPFTYLHVFSYSPRQGTDAFRMKNDVPKAVKKE
RNRRLTELGRDKALAFRQRLEGHTLSVLVESSRDPATGRLRGHSENFIPVLIDEEDTLMN
QIVPVHIQDVYGQQVSGCIL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcgccttcagcacactcggttgccggaccaaccagaacgacaccgcggagatg
caaacgcttctggaaaatgaggggtttaccatcgtcgatgcaaaccacccggcggacatt
tacgtcatcaactcctgcaccgtgacggccaaaagcgacgccagttcccggcaggcggtc
aagcggtctttggccatcaacgaagacgccatggtcgtcttcaccggttgttacgcgcag
aacaacccggaagaagtccggcagatttccggactggacgtgctgctgggcaacgccaac
aagctggaaatccttgcagccatccgccggcggctcgaacacctccaaagcagggacgtg
ttcggcgatcccgaagtggtgatgaccgacatcaccaagagctgggatttcaaaaccatt
ccggtgacggaattcggtggcaagtcgaaggccttcatcaaggttcaaaccgggtgcgat
gaatcgtgcacgttctgcaccgtagcgcgggcgcgcggccgctccatcagcgacgagcgg
gaaaacattctcaacaacgtgcgctgttcgctcgatgccggcttcaaggaaatcacgctg
accggcatcaatctgggcacctatggcatggacaaatcgccgccggaaacattttcctct
ttggtggaagacatcgccaatctcgatggggacttccgcctgcgtatcagcagcatcaac
ccgatggagatcgacgatcatctgatcgacctgatggcggagcgcgacaacatctgcccg
cattttcacatcccgttgcaaagcggggacgacacggtccttgccgggatgaaacgcaac
tacgactccggcaattaccgcaccgtggtcgagcgggccgccgagcgcattgaccacctc
ggtctgggtgcggatgtcatcgttgggtttccaggagaaaccgatgccatgtacgagaac
acataccggttggtggaggagttgcccttcacctacctgcacgtgttcagctattcacca
cgccagggaacggatgcgtttcgcatgaaaaacgacgtgcccaaggcagtgaaaaaagaa
cgcaaccggaggctgacggaactgggccgggacaaggcgctggctttccggcaacggctg
gagggccacacgctttctgttctggttgaaagcagccgcgatcccgcaacgggccggttg
cgcggtcattccgaaaacttcatcccggttctcatcgacgaagaagacacactgatgaat
cagatcgtgccagtccacattcaggatgtttacggccaacaggtttccggatgcatcctg
taa
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