Nitrospina watsonii: NSPWAT_1012
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Entry
NSPWAT_1012 CDS
T08754
Symbol
uvrB
Name
(GenBank) excision nuclease subunit B
KO
K03702
excinuclease ABC subunit B
Organism
nwt
Nitrospina watsonii
Pathway
nwt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nwt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NSPWAT_1012 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nwt03400
]
NSPWAT_1012 (uvrB)
DNA repair and recombination proteins [BR:
nwt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NSPWAT_1012 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NSPWAT_1012 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_16
AAA_30
DUF4368
DUF87
Kinesin
AAA_5
Motif
Other DBs
NCBI-ProteinID:
CAI2717871
UniProt:
A0ABM9HCA5
LinkDB
All DBs
Position
NSPWAT:complement(1075336..1077324)
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AA seq
662 aa
AA seq
DB search
MQPFTLNADFEPAGHQPEAIDQLFNQFRDGGHQTLLGVTGSGKTYTVANVVEKLQRPTLV
IAHNKTLAAQLYNEFKDFFPDNAVGYFVSYYDYYQPEAYLPTTDTYIEKDASINDEIDKM
RHAATHALFERRDVLIVASVSCIYGLGSPEAYHGMLLFVERGMETDREKVLRKLVDIQYK
RNDIDFQRGTFRVRGGIVEVLPVYERNEAVRIEFFGDEIERLSTFDPLTLETLNEIDRIA
IYPASHYTTPKDQLERAISDIQDELRERIQYFRSQNLLIEAQRIEQRTMFDLEMIREIGY
CQGIENYSRHLMGREPGSPPPTLLDYFPDDALFVIDESHVTIPQLHGMYKGDRARKETLI
RYGFRLPSAFDNRPLQWEEFAARDNSMLYVSATPGRYELDQSKDKVAELIVRPTGLVDPE
IEVRPIGGQVDNLYHEILKRAEGNERTLVTTLTKRFAEDLTEHFTEMGMKVKYLHSDIVT
IERIQIIRELRLGEFDALIGINLLREGLDIPEVSLIAILDADKEGFLRSATSLIQTSGRA
ARNLSGHVIMYADRITPSMQQAIDETQRRRAIQTEYNELHGITPTSIQKSIKDTMDGWER
HAMVPVVQEEEEEYMAGGNVLSFIAQLEKRMHTHAKNLEFEKAAALRDRINTLREKELGV
GS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccttcacactgaacgccgattttgagcctgccgggcaccagcctgaggccatc
gaccagttattcaaccagttccgcgacggcggccatcagaccctgttgggcgtcaccggc
tccggcaagacctacaccgtggccaacgtggtcgaaaaactgcaacgcccgaccctggtg
atcgcccacaacaagaccctcgccgcccagctttacaacgaattcaaggatttcttcccg
gacaacgcggtgggctattttgtcagttattacgattactaccagccggaagcctacctg
ccgaccaccgacacctacatcgagaaggacgcctcgatcaacgatgagatcgacaagatg
cgccacgccgccacccacgccctgttcgagcggcgcgacgtgttgatcgtcgccagcgtc
tcctgcatctacggtctcggttcgccggaagcctaccacggcatgctgttgttcgtggaa
cgaggcatggaaaccgaccgcgaaaaggtgctgcgcaaactggtggatatccagtacaag
cgcaacgacatcgatttccagcgcggcaccttccgcgtgcgcggcggcatcgtcgaagtg
ctgccggtttacgaacgcaacgaggcggtgcgcatcgagttcttcggcgacgagatcgag
cggctgtccacgttcgacccgttgaccttggagacgctgaacgagatcgaccgcatcgcc
atctacccggccagccattacaccacgcctaaagatcaactggagcgggcgatctccgac
atccaggacgagttgcgcgaacgcattcagtatttccgcagccagaacctgctcatcgag
gcgcaacgcatcgagcagcgcacgatgttcgatctggaaatgattcgcgagatcggctat
tgccagggcatcgaaaactattcgaggcatttgatgggacgcgagccgggcagcccgccg
ccgacgctgctcgattattttcccgatgacgcgctgttcgtcatcgacgaaagccacgtc
accatcccgcaactgcacggcatgtacaagggcgaccgggcccgcaaggaaacgctcatc
cgctacggcttccgcctgccgtcggcgttcgacaaccggcctctgcaatgggaggagttc
gcggcgcgcgacaacagcatgctgtacgtctccgccacccccggccgttacgaactggac
cagtcgaaagacaaggtggcggagttgatcgtgcgtcccaccggtctcgtcgatccggaa
atcgaggtgcgccccatcggcggccaggtggacaacctgtaccacgaaattttaaaacgc
gccgagggcaacgaacgcacgctggtcaccacgctgaccaaacgcttcgccgaagacctg
accgaacacttcaccgagatggggatgaaggtcaagtacctgcactcggacatcgtcacc
atcgagcgcattcagatcatccgcgagctcaggctgggcgagttcgacgctctgatcggc
atcaacctgctgcgcgaaggcctcgacatccccgaagtgtcgctgatcgccatcctcgac
gccgacaaggaaggcttcctgcgctcggcgacgtcgctgatccagacgtcgggacgcgcc
gcgcgcaacctgtccggccacgtcatcatgtacgccgaccgcatcacgccttccatgcag
caggccatcgatgaaacccagcgccgccgcgccatccagaccgaatacaacgagctgcac
ggcatcacacccacgtccattcagaaatcgatcaaggacacgatggacggttgggagcgc
catgcgatggtgccggtggtgcaggaagaagaggaagaatacatggcgggcggcaacgtg
ctcagtttcatcgcgcagttggaaaaacgcatgcacacccacgccaaaaatctggagttc
gaaaaagcagcggcgttgcgcgaccgcatcaacacgctcagagaaaaggagctgggcgtc
ggttcctga
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