Nitrospina watsonii: NSPWAT_1059
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Entry
NSPWAT_1059 CDS
T08754
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nwt
Nitrospina watsonii
Pathway
nwt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nwt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NSPWAT_1059 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nwt03019
]
NSPWAT_1059 (pnp)
03016 Transfer RNA biogenesis [BR:
nwt03016
]
NSPWAT_1059 (pnp)
Enzymes [BR:
nwt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NSPWAT_1059 (pnp)
Messenger RNA biogenesis [BR:
nwt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NSPWAT_1059 (pnp)
Transfer RNA biogenesis [BR:
nwt03016
]
Prokaryotic type
tRNA degradation factors
NSPWAT_1059 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
RRF
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
CAI2717918
LinkDB
All DBs
Position
NSPWAT:complement(1120291..1122396)
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AA seq
701 aa
AA seq
DB search
MQKKVETVLDGKTLSLEAGWLAKQANGSVVVRQGDTMVLVTATMASSAREGIDFFPLTVD
YRERTYAAGRFPGGFLKREARPSDPETLICRLIDRPIRPMFEDGFKNETQIVCFVISHDQ
ENPADVTAITGASAALTISDIPFHTPLAGVRVGRDKEGKFLVNPNLEQIQESDLNLVMAG
TADAIVMVEAGAQELDETTMIEALAFGHEHIKALVQMQVELRDMIGKEKIKMETPEVNAE
LRDKVVAFLTPGMEKVMQIGGKQERQDATDQLKESMKEQFNPEDDADIAADLKGFFKDVE
KNVMRNQTLEKQVRVDGRKTDEIRPITCQTGFVPRAHGSSIFTRGETQALVTTTLGTASD
EQRMETLDFRGTKTFMLHYNFPAFCTGEVKFISGPGRREIGHGMLAERGLAPMLPDRDTF
PYTIRIVSDILESNGSSSMASVCGGSLSLMDAGVPIKKPVAGIAMGLIKEDDKIAILSDI
TGTEDHLGDMDFKVVGTDAGITALQMDIKASGLTKELMAQALEQARAGRVFILGEMTKAL
DAPRPQMSKYAPRITTMTVPVDKIRDVIGPGGKVIRDIIDKTGVSIDIVDSGLVTIASAD
EAAAQKAIGIIQNLVQDVEVGKIYMGKVKKIMDFGAFVEIFPGTDGLVHISQICDRRIKQ
VNDEISEGDEIVVKVIDVDRNGKVKLSRKEAMRDEAAAALR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaaggtagagaccgtcttggacggcaaaaccctgtcgctggaagccggatgg
ctggccaaacaggccaacggatccgttgtggtccggcagggcgacaccatggtcctggtc
acggccaccatggcatcgagcgcccgcgaagggatcgatttttttccgctgactgtggat
taccgcgaacgcacctacgctgcgggacgttttcccggcggctttttgaaacgggaggca
cggccttccgatcccgaaacgctgatctgccggttgatcgaccggcccatccgtcccatg
ttcgaggatggttttaagaacgaaacgcagatcgtctgtttcgtcatttcccacgatcag
gaaaacccggcggacgtcaccgccatcaccggcgcttcggcggcgttgaccatttccgac
atcccgtttcacacgcccctggcgggtgtgcgcgttgggcgtgacaaggaaggcaaattc
ctggtcaatcccaatctggaacagattcaggaaagcgatctcaatctggtcatggccgga
acggcggacgccatcgtcatggtcgaagccggcgctcaggaactggacgagaccaccatg
attgaagctctggccttcggccacgagcacatcaaggcgctggtccaaatgcaggtggaa
ctgcgtgacatgatcggcaaagagaagatcaagatggaaaccccggaggtcaatgctgaa
ctccgcgacaaggtcgtcgccttcctcaccccgggcatggaaaaagtcatgcagatcggt
ggcaagcaggaacggcaggacgccacggaccagttgaaagagtccatgaaggaacagttc
aatccggaagacgatgcagatatcgcggcggatttgaaaggctttttcaaggacgtggaa
aaaaacgtcatgcgcaaccagaccctggaaaaacaagtccgggtggacggacgcaagacg
gacgaaatccggcccatcacctgccagaccggcttcgtgccgcgggcacacgggtcttcc
attttcacccgtggcgaaacgcaggcgctggtcaccaccacgctgggcaccgcgtcggac
gagcaacgcatggaaacgctggatttccgcggcaccaagacgttcatgctgcattacaac
ttcccggcattctgtaccggcgaagtgaaattcatctccggaccgggccgccgcgaaatc
ggccacggcatgctggcggaacggggcctggctccaatgctgccggaccgggacacgttt
ccctataccatccgcatcgtctccgacattctggagtccaacggatcgtcgtcgatggct
tcggtgtgtggcggcagcctgtccctgatggacgcaggcgtccccatcaaaaaaccggtg
gcgggcatcgccatgggcctcatcaaagaggatgacaagatcgccattctgtcggacatc
accggcaccgaagatcacctcggtgacatggatttcaaggtggtgggaaccgatgccggc
atcacggccctgcagatggacatcaaagccagcggcctgaccaaggagctgatggctcag
gctctcgaacaggcgcgtgcaggccgcgtgttcattctgggcgagatgaccaaagcgctg
gacgcaccgcgcccgcagatgtccaagtacgcaccgcgcatcaccaccatgaccgtcccg
gtggacaagatccgcgacgtcatcggaccgggcggcaaggtgatccgcgacatcatcgac
aaaaccggtgtctccatcgatatcgtggacagcggtctggtgaccattgcctcggcggac
gaagccgccgcccagaaggcgatcggcatcatccagaacctcgtgcaggatgtcgaagtc
ggcaagatttacatgggcaaggtgaagaagatcatggacttcggtgccttcgtcgaaatc
tttccgggtaccgacggactggttcacatctcgcagatctgcgaccgccgcatcaagcag
gtcaacgatgaaatctccgaaggagatgaaatcgtggtcaaggtcatcgacgtggaccgc
aacggtaaagtcaagctgagccgcaaagaggccatgcgcgacgaagccgccgcggcactg
cggtaa
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