Nitrospina watsonii: NSPWAT_1061
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Entry
NSPWAT_1061 CDS
T08754
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nwt
Nitrospina watsonii
Brite
KEGG Orthology (KO) [BR:
nwt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nwt03016
]
NSPWAT_1061 (truB)
Enzymes [BR:
nwt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NSPWAT_1061 (truB)
Transfer RNA biogenesis [BR:
nwt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NSPWAT_1061 (truB)
Prokaryotic type
NSPWAT_1061 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
YmcF-like
Motif
Other DBs
NCBI-ProteinID:
CAI2717920
LinkDB
All DBs
Position
NSPWAT:complement(1122833..1123762)
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AA seq
309 aa
AA seq
DB search
MNNIINLYKPSGPTSFDMVRSVRRLLQVKKVGHIGTLDPMAEGVLPLCMGQSTRVIQFLT
PLTKVYRATLTLGTSTDTQDAQGVVLESRDPSAVSETDLTRLLLQYVGPQKQVPPMYSAK
KKNGIPLYKLARNGITIDRKPVDIKIYAIEFIEKIGQRVHFRVHCSAGTYVRTLCHDIGE
TLGCGAHMSHLIREKVGEFDLESSLTLEELELAKEQGNLSTKLLQTETALDFMPEIQVYP
DRVQSIAHGRALSKAWVRQSPNRFGPGMNFRVTNEDNRLVAIVEPLVDQDRFLRMEPDDI
AFKLKRVLI
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaataacatcatcaacctgtacaagccctccggacccacctcgttcgacatggtgcgg
tcggtgcgccgcttgctccaggtcaagaaagtgggccacatcggcaccctggaccccatg
gcggaaggcgttttgcccctctgcatgggccagtccacccgcgtcatccagtttctgact
cccctgaccaaggtctatcgcgccaccctgaccctgggcacgagcaccgacacgcaggac
gcccagggggtggtgctggaaagccgcgacccgtccgcggtgagcgaaacggacctcacc
cgcctgctgctacagtacgtgggcccgcaaaaacaggtgcctcccatgtattcggccaaa
aaaaagaatgggattcccctttacaaattggccagaaatggtattactatcgacagaaaa
ccggtggatatcaagatttacgccatcgagtttatcgagaaaatcggtcagagggtccac
ttccgcgtacactgttccgcggggacctatgtccgcaccttgtgtcatgatatcggcgaa
acgctggggtgcggcgcccacatgtcgcacctgattcgggagaaggtgggcgaattcgat
ttggagtcttccctgactttggaagagttggaactcgccaaggaacaaggcaacctttcc
accaaactcctgcaaacggaaacggctctggatttcatgcccgaaatccaggtttatccg
gatcgagtccaatccattgcgcatggccgggccctttctaaagcctgggtgcggcaatct
cccaaccggtttggaccgggaatgaatttccgtgtgacgaatgaagacaaccgcctggtg
gccattgtcgagcccctggtggatcaggaccggtttctgcgtatggaaccggatgatatt
gcttttaaactcaaacgcgttttgatttga
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integrated database retrieval system
