Nitrospina watsonii: NSPWAT_1127
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Entry
NSPWAT_1127 CDS
T08754
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
nwt
Nitrospina watsonii
Pathway
nwt02020
Two-component system
nwt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nwt00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NSPWAT_1127 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NSPWAT_1127 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwt03021
]
NSPWAT_1127 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nwt02035
]
NSPWAT_1127 (whiG)
Transcription machinery [BR:
nwt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NSPWAT_1127 (whiG)
Bacterial motility proteins [BR:
nwt02035
]
Flagellar system
Flagellar assembly proteins
Stator
NSPWAT_1127 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
DUF4099
DUF2963
Motif
Other DBs
NCBI-ProteinID:
CAI2717986
UniProt:
A0ABM9HD53
LinkDB
All DBs
Position
NSPWAT:1197237..1197998
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AA seq
253 aa
AA seq
DB search
MAGKTQSSEAIQISPENTEQIIMEYSPMIKYVANRIAMRLPSHIEVDDLISVGVLGLIDA
IEKYDPNRGAKFKTYAEFRVRGSILDELRSLDWVPRSIRQKASEMDALTTRLQGEFGRPP
EDEEIAAEMGVSIEDFFTAMNETRSVPILSLEDLGINKETGEQQNLLDCLMGDMEADPQT
QIRLNELKKIIAEAIDALPEKERLMISLYYYEELTMKEIGEVLSITESRVSQIHSKAVFR
LRTKLKSILADEV
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtaaaacgcaatcttcagaagcaattcaaatctctccggagaacacggaacag
atcatcatggagtattcaccgatgatcaagtacgtggccaaccggattgcgatgcggctg
ccttcccacattgaagtggacgatttgatcagcgtcggtgtgctgggtttgatcgacgcg
atcgagaaatacgatcccaaccggggagccaagttcaaaacgtacgcggaattccgggtg
cgtggttcgattctggatgagttgcggagcctggactgggtgccgcggtctatccggcaa
aaagcttccgagatggatgcgctcaccacgcggctgcagggcgagttcggacggccgccg
gaggatgaagaaattgcggcggagatgggcgtcagcatcgaagatttttttacggccatg
aacgaaacccgcagcgttcccatcttgagtctcgaagatctgggcatcaacaaggagacc
ggggaacagcagaatctgctcgattgtctcatgggcgatatggaagccgatcctcaaact
cagatccggctcaacgaactgaagaagatcatcgccgaagccatcgatgccttgccggaa
aaagaacgcctgatgatctcgctttactattatgaagaattgaccatgaaggaaatcggc
gaagtgttgagcatcaccgaatcccgcgtgtcccagattcattccaaggcggtctttcgg
ttacggaccaagttgaaatccatactggcagacgaggtgtga
DBGET
integrated database retrieval system
