Nitrospina watsonii: NSPWAT_1338
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Entry
NSPWAT_1338 CDS
T08754
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nwt
Nitrospina watsonii
Brite
KEGG Orthology (KO) [BR:
nwt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwt03032
]
NSPWAT_1338 (topA)
03400 DNA repair and recombination proteins [BR:
nwt03400
]
NSPWAT_1338 (topA)
Enzymes [BR:
nwt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NSPWAT_1338 (topA)
DNA replication proteins [BR:
nwt03032
]
Prokaryotic type
DNA Topoisomerases
NSPWAT_1338 (topA)
DNA repair and recombination proteins [BR:
nwt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NSPWAT_1338 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF2387
Auto_anti-p27
ATP-cone
Alpha-2-MRAP_N
ADK_lid
Motif
Other DBs
NCBI-ProteinID:
CAI2718197
LinkDB
All DBs
Position
NSPWAT:1412102..1414354
Genome browser
AA seq
750 aa
AA seq
DB search
MGKSLLIVESPTKVETLKKIIGKDFVVKASVGHIKDLPKKKLGVDVDNDFSPEYITIRGK
GKILNALKAAAKKADNIYLAPDPDREGEAIAYHICNEVAKITKGKIYRVMFNEITKKAVT
EAIKHPTELNPNRVNAQQARRILDRLVGYKISPILWKKVQRGLSAGRVQSVALRMICDRE
EEIKSFKSEEYWTITIDLEGSKEPEFQAKLFKVDGKKAEIGNEEQAQAIVKAVEKGEFVL
ADIVKKERKRNPSAPFITSTLQQEASRKLNFSPKKTMMLAQRLYEGIALGKDGTVGLISY
MRTDSTKLADEAIGDIRRLIEDKYGKEYVPKAPNVYKSKKTAQEAHEAIRPTNIMLEPKA
IKNYLEKDLYNLYELIWARTLSCQMVPAVLDTTQFDVQTGKHLFRANGSVIKFDGFMKVY
VEDTDDEGAGMKSTEKILPDLTKGEVLEMKKVLPEQHFTQPPPRFTEAMLVKALEEKGIG
RPSTYAAIISTIKDRDYIRSEDKRVTPTELGHLVSELLVESFPDIMTEAFTAQMEDQLDQ
IEEGKIEWVDTLRSFYGPFEKDLIEAEAKMKDIKSQVEETDEVCEKCNSPMIIKWGRFGK
FMACSGYPECKNTKEIGEDTSDSGKKASEKVEGNCDKCGAALVMKMGRFGKFLACSEYPE
CKFTKPISLGIKCPEEDCKGHIAPRRTKKGRTFYGCSEYPNCKFTSWDKPVDEACPKCSN
AYMVTKWKKNEGESIVCPSCRFKKTSDEAA
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatctttgttgattgtggagtctccgacgaaagtcgaaactctgaaaaaaatc
atcgggaaggacttcgtcgtcaaagcctcggtgggtcacatcaaagacctgcccaagaaa
aagctgggggtggatgtcgataacgatttcagtcctgaatacatcaccattcggggcaag
ggcaagatcctcaatgcgctgaaagcggccgccaagaaggccgacaatatctacctcgcc
cccgacccggaccgggaaggggaggccatcgcctaccacatctgcaatgaagtcgcgaag
atcaccaagggaaagatttaccgggtgatgttcaatgagatcaccaaaaaagccgtcacc
gaagccatcaagcatcccaccgagttgaacccgaaccgggtcaacgcacagcaggcccgc
cgcatactggaccggctggtggggtacaagatcagccccattttgtggaaaaaagtgcag
cggggcctgagcgccggacgcgtgcagtcggtggcgctgcgcatgatctgcgaccgcgaa
gaggaaatcaaaagtttcaagagcgaagaatactggaccatcaccatcgatctggaaggc
agcaaggagccggagtttcaggccaagctgttcaaggtggatggcaagaaggccgagatc
ggcaacgaggaacaggcgcaggccatcgtcaaggcggtggaaaagggcgagttcgttctt
gcggacatcgtcaagaaggaacgcaagcgcaatccttcggccccgttcatcaccagcacc
ctgcagcaggaagcgtcgcgcaagctgaacttctcaccgaagaaaaccatgatgctggcg
cagcgcctgtatgaaggcattgccctgggtaaagacggcacggtggggttgatctcctat
atgcgtaccgactccaccaagcttgccgatgaagcgattggggacatccgccgtctgatc
gaggacaagtacggcaaggaatacgtccccaaagcgccgaacgtgtacaaaagcaagaag
accgcacaggaagcgcatgaggcgatccggccgacgaacatcatgctcgagcccaaggcc
atcaaaaattatctggagaaagacctctataatctgtacgagttgatctgggcgcggacg
ctgtcctgccagatggtgccggcggttctcgacacgactcagtttgacgtgcagaccggg
aaacacctgttccgcgccaacgggtcggtgatcaagttcgacggcttcatgaaagtgtac
gtcgaagacacggacgacgaaggcgcgggcatgaagtccaccgagaaaatcctgcccgac
ctcaccaagggcgaggtgctggaaatgaagaaagtgctgccggagcagcatttcacgcag
ccgccgccgcgtttcaccgaggccatgctggtcaaggcgctggaggagaaaggcatcggc
cgtccgagcacctatgcggccatcatcagcaccatcaaggaccgcgactacattcgcagt
gaagacaagcgtgtcacgccgacggagctgggccacctggtgtcggagttgctggtggaa
agctttccggacatcatgacggaagcgttcacggcgcagatggaagaccagctggatcag
attgaagagggcaagatcgaatgggtggacacgctgcgttcgttctacggtccgtttgaa
aaggatctgatcgaagccgaagccaagatgaaggatatcaaaagccaggttgaggaaacc
gatgaggtgtgcgagaagtgcaacagtcccatgatcatcaagtggggccgcttcggcaaa
ttcatggcttgctccgggtatccggaatgcaagaacaccaaggaaatcggcgaggacacg
agtgacagcggtaaaaaagcttccgaaaaagtggaaggcaactgcgacaaatgcggcgcg
gcgctcgttatgaaaatgggacggtttggtaagtttctggcctgctcggaatatccggaa
tgcaagttcaccaaacccatcagcctcggcatcaaatgtccggaagaagactgcaagggc
cacatcgccccacggcgcaccaaaaagggtcgtaccttttacggatgcagcgaatacccg
aattgtaaattcacctcctgggacaagccggtggacgaagcctgtcccaaatgcagcaac
gcctacatggtcaccaagtggaagaaaaatgaaggcgaaagcatcgtgtgccccagttgc
cggttcaagaaaacttcggacgaagcggcataa
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