Nitrospina watsonii: NSPWAT_1933
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Entry
NSPWAT_1933 CDS
T08754
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nwt
Nitrospina watsonii
Pathway
nwt03030
DNA replication
nwt03430
Mismatch repair
nwt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NSPWAT_1933 (dnaE)
03430 Mismatch repair
NSPWAT_1933 (dnaE)
03440 Homologous recombination
NSPWAT_1933 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwt03032
]
NSPWAT_1933 (dnaE)
03400 DNA repair and recombination proteins [BR:
nwt03400
]
NSPWAT_1933 (dnaE)
Enzymes [BR:
nwt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NSPWAT_1933 (dnaE)
DNA replication proteins [BR:
nwt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NSPWAT_1933 (dnaE)
DNA repair and recombination proteins [BR:
nwt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NSPWAT_1933 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MamS_MamX
Motif
Other DBs
NCBI-ProteinID:
CAI2718789
UniProt:
A0ABM9HES7
LinkDB
All DBs
Position
NSPWAT:complement(2035207..2038668)
Genome browser
AA seq
1153 aa
AA seq
DB search
MRHSNFVHLHVHTHFSLLDSSLRHEALFKRAEEYKMPAVAMTDHGNLFGAMEFYQGARKH
GLKPIIGCEVYVAPESRLKKDDNFRLRDAAHHLILLVKNQTGYKNLVKLVTSGYIEGFYY
KPRIDKDLLAEHAEGLIALSSCNRGELAHYINKENLPRALKVAEQYKEIMGDDNFYLELQ
DHQLDWQEAINNGLIDIGKKLDLPVVATNNCHYLDKEDYRSHEILLCLQTGKTMDDPYRM
KYHSDEYYFKSPKEMEERFRHLPEAIENTIKIAERCNLDLETGADNLPEYPVPEAHTLYS
YLEEQSREGLAERFGEMDKAGLEYDRTVYEQRLDEELAIIKKMGYPGYFLIVWDFIRYAR
ENGIPVGPGRGSAAGSLVAYTLRITNLDPIEYDLLFERFLNPERVSMPDIDIDFCMEKRD
DVIKYVTEKYGGHDFVTQIITFGSMNAKGVLRDVGRVLGMPYGEVDKIAKLVPNRLNVTL
TDAMNEESRFKEMAKENENVDELLKVALKLEGLPRHCSTHAAGVVISPKPLTEFLPLYKG
NNDEIVTQFSMNNIEKLGLLKMDFLGLRTLTVIHNALRLIRESEGTELDIDAIPKDDADT
YKLLGEARTRGVFQLESSGMRDLLLKMKPDSFEDIIALLALFRPGPLESGMVDDYVKRKH
GTLEEKYELPQLKDILKETHGVILYQEQVMKIANVLAGFTLGDADLLRRAMGKKKPEEMA
QQREKFYTGSHKNKIPDKKSERIFDLMEKFAGYGFNKSHSAAYALISYQTAYLKAHYPLQ
FFGALITSEMDNTDKVIRYINDCREMGIQMMPPDVNRSYRDFSIHEDKLLFGLGAIKNVG
TSAIDIIIDTRNKVGEFTSIKQFCETVDLNKVNKRVIESLIKSGAFDSVGESRASMMHHL
QAYMDIGQSRQRDRLLGQSSMFDLLGEEEADVLVTAEPIEEWSDHDRLKFEKETIGFYVS
GHPLMKYQKDIAWFTDATSANLAEQHNRKTVSIAGVPFKIVTKTTKKGDKMALMTLEDLQ
GTVEVTVWPETYKNSLEILEQDGPILVKGTVEADDNWPKVIANEIRPLSEAKDQWKGTVH
IHIRTPGLEKAMLHSVKDVLAKYPGSNQLLVHFLFPEGQAKQRTVETGIRVKPCDEIIAQ
IEELLGEKSINFE
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgcgccattccaatttcgtgcacctgcacgtccacactcatttcagcctgctggactcg
tcgttgcgtcacgaggccctgttcaaacgcgccgaggagtacaagatgcccgccgtggcg
atgaccgaccacggcaatctgttcggcgcgatggagttctaccagggcgcgcgcaagcac
ggcctgaaaccgatcatcggctgtgaagtctatgtcgccccggaaagccgcctgaagaaa
gatgacaacttccgcctgcgcgacgccgcccatcatctcatcctgctggtcaagaaccag
accggttataaaaatctcgtcaagctggtcacctccggctacattgagggcttctactac
aaaccgcggatcgacaaggacctcctggccgagcacgccgaagggctcatcgccttgagt
tcgtgcaaccgcggcgagctcgctcattacatcaacaaggaaaacctgccgcgcgcgctc
aaggtggcggaacagtacaaagagatcatgggcgacgacaacttttacctggagttgcag
gatcaccagctggactggcaggaggccatcaataacgggctgatcgacatcggcaaaaag
ctcgacctgccggtggtcgccaccaacaactgccactacctcgataaagaagattaccgc
tcgcacgaaatcctgctgtgtctgcagaccggcaagacgatggacgacccttaccgcatg
aagtaccactcggacgagtattacttcaagtcgcccaaggagatggaagaacggttccgg
catttgccggaagccattgagaacaccatcaagatcgccgagcgctgcaacctcgatctc
gaaaccggcgccgacaacctgccggagtacccggtgccggaagcgcacaccttgtattcc
tatctggaagaacaatcccgcgaaggtttggcggaacgattcggcgaaatggacaaggcg
gggctggaatacgaccgcacggtctatgaacagcggctggacgaggagttggcgatcatc
aagaagatgggttatcccggttactttctgatcgtctgggatttcatccgctatgcgcgc
gagaacggcattcccgtcggacccggtcgcggttccgccgccggcagcctcgtcgcctac
accctccgcatcaccaacctcgaccccatcgagtacgatctgctgttcgaacgtttcctg
aatccggagcgggtgagcatgcccgatatcgatatcgacttctgcatggagaagcgcgac
gacgtcatcaaatacgtcacggaaaaatacggcggtcatgacttcgtgacgcagatcatc
accttcggcagcatgaacgccaagggcgtgctgcgcgatgtcggccgtgttctgggcatg
ccctacggcgaggtggacaagatcgccaagctcgttcccaaccggttgaacgtcaccctc
accgacgccatgaacgaggaatcgcggttcaaggagatggcgaaggagaacgaaaacgtc
gatgaactgttgaaggtggcgctcaagctggaggggctgccgcgccattgttcgacgcac
gcggcgggggtggtgatctcgcccaaaccgctcaccgagttcctgccgctgtacaagggc
aacaacgacgaaatcgtgacccagttctcgatgaacaacatcgaaaaactgggattgttg
aagatggacttcctgggtctgcgcacgctgacggtgatccacaacgcgctccggctgatc
cgcgaatcggagggcactgaacttgacatcgacgccatccccaaagacgacgccgatacc
tacaagctgctgggtgaggcccggacgcgcggcgtgttccagttggaaagctccggcatg
cgcgatctcctgctcaaaatgaaaccggacagtttcgaggacatcatcgcgctgttggcg
ctgttccgtccggggccgctggagagcggcatggtggacgattacgtcaagcgcaagcac
ggcaccctggaagaaaaatacgagctgccgcagctgaaggacatcctgaaggaaacgcac
ggcgtcatcctctaccaggagcaggtgatgaagatcgccaacgtcttggcgggcttcacg
ttgggcgacgccgacctgttgcgccgcgccatgggcaaaaagaagccggaagagatggca
cagcagcgcgaaaagttttacacgggcagccacaagaacaagattccggataagaagtcg
gaacgtatcttcgacctgatggagaaattcgcgggatacggtttcaacaaatcgcacagc
gccgcctacgcactcatctcctatcagaccgcatacctgaaggcgcattacccgttgcag
tttttcggcgcgctgataaccagcgaaatggacaacaccgataaggtgatccgttacatc
aacgactgccgcgaaatgggcattcaaatgatgccgccggacgtcaaccgcagttatcgc
gacttctccatccacgaggacaagctgctgttcgggctgggcgcgatcaagaacgtcgga
acgtcggcgatcgatatcatcatcgacacgcgcaacaaggtcggcgagttcacctccatc
aaacagttctgtgaaacggtggacctcaacaaggtcaacaaacgcgtcatcgaaagcctc
atcaagagcggcgcgttcgattcggtgggcgaaagccgcgccagcatgatgcatcatttg
caagcgtacatggacatcggccagtcccggcagcgcgaccgcctgctgggacagtccagc
atgttcgacctgctgggcgaagaggaggcggatgtgctggtgacggcggaaccgatcgag
gagtggagcgatcacgaccggctcaagtttgaaaaggaaacgatcggcttctatgtgtcc
ggtcatccgttgatgaaataccagaaggacatcgcctggttcaccgacgccacctccgcc
aatcttgcggaacagcacaatagaaaaacggtcagcatcgccggcgtgccgttcaagatc
gtcaccaagaccacgaagaagggcgacaagatggcgctgatgacgctggaggatctgcag
ggcacggtggaggtcaccgtctggccggaaacgtacaagaattcactcgagattctggag
caggacgggccgatcctggtcaaaggcacggtcgaggccgatgacaactggccgaaagtc
atcgccaacgaaatccggcctttgtccgaagccaaggatcaatggaagggcaccgtgcac
atccacatccgcacgccgggtctggaaaaggcgatgctgcattcggtgaaggacgtgctg
gcgaaataccccggctccaatcaactgctggtgcattttctgtttcccgaggggcaggcc
aaacagcgcacggtggaaaccgggatccgggtgaagccctgcgacgagatcatcgcgcag
atcgaagagttgcttggcgagaaatcgatcaacttcgaatag
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integrated database retrieval system
