Nitrospina watsonii: NSPWAT_2443
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Entry
NSPWAT_2443 CDS
T08754
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nwt
Nitrospina watsonii
Pathway
nwt00300
Lysine biosynthesis
nwt00470
D-Amino acid metabolism
nwt01100
Metabolic pathways
nwt01110
Biosynthesis of secondary metabolites
nwt01120
Microbial metabolism in diverse environments
nwt01230
Biosynthesis of amino acids
Module
nwt_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nwt00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NSPWAT_2443 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NSPWAT_2443 (dapF)
Enzymes [BR:
nwt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NSPWAT_2443 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
CAI2719299
UniProt:
A0ABM9HGM5
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Position
NSPWAT:complement(2536178..2536987)
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AA seq
269 aa
AA seq
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MNISFTKMSGSGNDFVIIDNRDGVVADAIKRDFAKKVCRLKDSVGADGVIFVENTEKADY
KWDFYNNDGSSAEMCGNGGRCVARFAFEKGIASQTHSFETMAGIISAEVNGPMVKVKLTP
PEHMQEGLDLEFEGVHYKVDSVNTGVPHAIVFSEDVEKEDVTAIGRSIRYHTVFAPAGTN
VDLVQRQNGGLKVRTYERGIEGETLACGTGAVASALIAMQRFEIQSPVEVETRGGEVLKV
HIEPNEGGLPTVYLEGMTKLVFEGNLVEL
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaacatctctttcaccaaaatgagtggaagcggcaacgatttcgtcatcatcgataac
cgggatggcgtggttgccgatgccatcaaacgtgattttgccaagaaggtctgccggttg
aaggattccgtcggcgccgacggcgtgatctttgtcgagaacacggaaaaagccgattac
aagtgggatttttacaacaacgacggctcgtcggccgaaatgtgcggcaacggcggccgc
tgcgtggcgcgttttgcatttgaaaaaggcatcgcttcccaaacgcattcgttcgagacc
atggccgggatcatcagcgccgaggtcaatggaccgatggtgaaggtgaagctgacgccg
ccggaacacatgcaggaaggcctcgacctcgaattcgaaggcgtgcattacaaggtggac
agtgtcaacaccggtgtgccgcacgccatcgtcttttccgaagacgtggagaaggaagac
gtgacggcgatcggccgaagcatccgctaccacaccgtgtttgctccggcgggcaccaat
gtggacctggtacagcggcagaacggcggtttgaaagtgcgcacctacgaacgcggcatc
gaaggcgaaaccctcgcctgcggcaccggcgcggtggcttccgcgttgatcgccatgcag
cgattcgagattcagtccccggtcgaggtggaaacccgcggcggggaagtgttgaaagtg
catatcgagcccaacgaaggcggtctgcccacggtgtacctggagggcatgaccaaactg
gttttcgaagggaacctcgtcgaactctga
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