Neisseria weixii: CGZ65_00945
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Entry
CGZ65_00945 CDS
T07968
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nwx
Neisseria weixii
Pathway
nwx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nwx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGZ65_00945 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwx03021
]
CGZ65_00945 (rpoC)
03400 DNA repair and recombination proteins [BR:
nwx03400
]
CGZ65_00945 (rpoC)
Enzymes [BR:
nwx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGZ65_00945 (rpoC)
Transcription machinery [BR:
nwx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGZ65_00945 (rpoC)
DNA repair and recombination proteins [BR:
nwx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGZ65_00945 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
ATD64241
LinkDB
All DBs
Position
173027..177202
Genome browser
AA seq
1391 aa
AA seq
DB search
MNLLNLFNPLQTAGMEEEFDAIKIGIASPDTIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAFVVTDPGMTPLQRRQLLTEDDYYNKLDEYGDDFDA
KMGAEGIRELLRTLDVAGEIEILRQELESTGSDTKIKKIAKRLKVLEAFHRSGMKLEWMI
MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELSAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG
PYLRLHQCGLPKKMALELFKPFIFHKLEKQGLATTVKAAKKLVEQEVPEVWDILEEVIRE
HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINAKGEGSLFADVKEVHRAYH
TKQVELGTKITVRLREWVKNENGELEPVVNRYETTVGRALLSEILPKGLPFEYINKALKK
KEISKLINASFRLCGLRDTVIFADHLMYTGFAYAAKGGISIAVDDMEIPKEKAVLLAEAQ
AEVKEIQDQYRQGLVTNGERYNKVVDIWGRAGDRIAKAMMDNLSTQKVIDREGNEVDQES
FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTTDGFVMKAVVQGGDVIEALRDR
ILGRVTASDVVDPSTGETLVEAGTLLNEKLVDMIDQSGVDEVKVRTPITCKTRHGLCAQC
YGRDLARGKLVNAGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTA
RFSSQMRYVANNKGELVVIGRSCEVVIHDDIGRERERHKVPYGAILLVQDGEAIKAGQTL
ATWDPHTRPMITEHAGLVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSAGTSKLLRP
TVKLLDENGLEICIPGTSTPVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITG
GLPRVAELFEARIPKDAGMLAEITGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQIL
VHDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVII
RQMLRRVNIADSGETSFITGEQVERGDVILENEKMIAEGKEPARYENVLLGITKASLSTD
SFISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRSRRQQTHGGE
VEQLQIEDSAE
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgttgaacttatttaatccgttacaaacagcgggcatggaagaagagtttgat
gccattaaaataggcatcgcctctccggataccatccgctcttggtcttacggtgaagtg
aaaaagccggaaaccatcaactaccgtacgttcaaaccggagcgcgacggtttgttctgc
gccaaaattttcggcccggtgaaagactacgaatgtttgtgcggtaaatacaagcgcttg
aaatttaaaggcgtaacctgtgaaaaatgtggcgtagaagtgactttgtctaaagttcgt
cgtgagcgcatgggacacatcgaattggctgcgcctgttgcccacatctggtttttgaaa
tcactgccgtcacgcttgggtatggttttagacatgaccctgcgcgacatcgaacgcgta
ttgtactttgaagcctttgtggtgactgatccgggtatgaccccgctgcaacgccgtcaa
ttgctgaccgaagacgattactacaacaaattggacgaatacggcgacgatttcgatgcc
aagatgggtgctgaaggtatccgcgaattgctgcgaacattagatgtggccggtgaaatc
gaaatattgcgtcaagaattggaatcaacaggttctgacaccaaaatcaaaaaaatcgcc
aaacgtttgaaagtgttggaagcgttccatcgttcaggtatgaaacttgagtggatgatt
atggacgtgttgccggtattgccgcctgatttgcgtccgttggtgcctttggatggcggc
cgttttgccacttccgatttgaatgatctgtaccgtcgcgtgattaaccgtaataaccgt
ctcaaacgtttgttggagttgagcgcaccggacatcattgtacgcaacgaaaaacgtatg
ctgcaagaagcagtcgacagcttgttggataatggccgtcgcggtaaagccatgaccggt
gcgaacaagcgcccactgaaatcgttggccgacatgattaaaggtaagggcggccgcttc
cgtcaaaatctgttgggtaaacgtgtggactattctggccgttcggtgattaccgtgggc
ccttacctgcgcctacaccaatgtggtctgcccaaaaaaatggctttggagctgttcaaa
ccgtttattttccacaagctggaaaaacaaggcttggcaaccaccgttaaagcggctaaa
aaattggttgagcaagaagtaccggaagtatgggacatcttggaagaagtcatccgcgaa
cacccaatcatgctgaaccgtgcgccgacgctgcaccgtttgggtattcaagcatttgag
ccgattctgattgaaggcaaagccattcagttacacccattggtgtgtgccgcgtttaat
gccgactttgacggtgaccaaatggcggttcacgttccattgagcttggaagcgcaaatg
gaagcacgcactttgatgctggcttcgaacaacgtattgtctccggccaacggcgaaccg
attatcgtaccgtctcaagacatcgtattgggtctgtactacatgacccgcgaccgcatc
aacgctaaaggcgaaggcagcctgtttgccgacgtgaaagaagtacaccgcgcgtaccac
actaaacaagtggagttgggtaccaaaatcactgtgcgcctgcgtgaatgggtgaaaaat
gaaaacggtgaattagagccggtagtcaaccgctacgaaaccaccgtaggccgtgctttg
ttgagcgaaattctgcctaaaggcctgccgtttgaatacattaacaaggcactgaagaaa
aaagaaatttctaagctgattaacgcctcattccgcctgtgcggcctgcgcgacaccgtg
atttttgccgaccacctgatgtacaccggttttgcatatgcagctaaaggcggtatctca
attgcggtcgacgatatggaaattccgaaagaaaaagccgtattgctggccgaagcgcaa
gccgaagtgaaagaaatccaagaccaataccgtcaaggtttggtgaccaacggcgaacgc
tacaacaaagtggtcgatatttggggacgtgccggtgaccgcattgccaaagcgatgatg
gacaacctgtctacccaaaaagtaattgaccgcgaaggcaacgaagtggatcaagagtcg
ttcaactccatctatatgatggccgattccggtgcccgtggttcggcagcccagattaaa
cagctttccggtatgcgtggtctgatggccaaaccggacggctcgattatcgaaacgccg
attacgtctaacttccgtgaaggtctgaccgtattgcaatactttattgcgacccacggt
gcgcgtaaaggtcttgccgataccgccttgaaaaccgcaaactccggttacttgacccgc
cgtttggtggacgtgacccaagacttggtggtggtggaagacgattgcggcacaactgat
ggcttcgtaatgaaagccgtggtacaaggtggtgacgtgattgaagccttgcgcgaccgt
attttgggccgtgtgactgcttccgatgtggttgacccgtcaacaggcgaaaccttggta
gaggccggtactttattgaacgaaaaactggttgacatgattgaccaatctggtgtggat
gaagtgaaagtacgcacgccgattacctgtaaaacccgtcacggtttgtgtgcccaatgt
tacggccgtgacttggcgcgcggtaaactggtaaatgcaggtgaagcggtcggtgtgatt
gccgcccaatcaattggtgagccgggtacccagctgaccatgcgtaccttccacatcggt
ggtgcggcttcccgagcagctgctgccagccaagtggaagccaaatctaacggtaccgca
cgtttcagcagccaaatgcgttatgttgccaacaacaaaggcgaactggtggtgattggc
cgttcttgcgaagtggtgattcacgatgacatcggccgcgagcgcgaacgtcataaagtg
ccttacggtgccattttgctggtacaagacggcgaggccattaaagcaggtcaaaccttg
gcaacatgggatccgcatacccgtccgatgattaccgaacatgccggcttggtgaaattt
gaaaacgtggaagaaggcgtgaccgttgccaaacaaaccgatgatgtaaccggtttgtct
accttggtcgtaattgatggtaaacgccgctctgccggtacctctaaattgttgcgccca
acggtgaaactgttggacgaaaacggtttggaaatctgcattccgggtacctcaactccg
gtatcgatggccttcccggtaggcgcggtgattaccgtgcgtgaaggtcaggaaatcggt
aaaggtgacgtgttggcgcgtattccgcaagcatcgtctaaaacccgcgacattaccggt
ggtctgccgcgtgtggccgaattgtttgaagcgcgtatcccgaaagatgccggtatgctg
gctgaaatcaccggtaccgtttccttcggcaaagaaaccaagggtaaacaacgcttaatc
atcaccgatgttgacggcgtggcttacgaaaccttgatttcaaaagagaagcaaatcttg
gtgcacgacggccaagtggtgaaccgcggtgagaccatcgttgacggtgccgttgatcca
catgatattctgcgtctgcaaggtatcgaagcattggcacgctatattgttcaagaagtg
caagaagtttaccgcctgcaaggtgtgaagatttccgataaacacatcgaagtcatcatc
cgccaaatgctgcgtcgtgtgaatattgccgactcgggcgaaaccagcttcattaccggt
gagcaagtcgagcgtggcgatgtgatattggaaaacgagaaaatgattgccgaaggtaaa
gagccggcgcgttacgaaaacgtgttattgggtattaccaaagcgtcgttgtcgaccgac
agctttatctcagcggcttccttccaagagactacccgcgtcttgaccgaagcagcgatt
atgggcaaacaagacgaactgcgcggtttgaaagaaaacgtcattgtcggccgcctgatt
cctgccggtaccggtttgacctaccaccgcagccgtcgccagcaaacccatggcggagaa
gtcgagcaactgcagattgaagactcggcagagtaa
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