Nocardia yamanashiensis: LTV02_00970
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Entry
LTV02_00970 CDS
T07935
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nya
Nocardia yamanashiensis
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nya03032
]
LTV02_00970
03036 Chromosome and associated proteins [BR:
nya03036
]
LTV02_00970
03400 DNA repair and recombination proteins [BR:
nya03400
]
LTV02_00970
DNA replication proteins [BR:
nya03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LTV02_00970
Chromosome and associated proteins [BR:
nya03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LTV02_00970
DNA repair and recombination proteins [BR:
nya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LTV02_00970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
UGT42035
LinkDB
All DBs
Position
203830..204468
Genome browser
AA seq
212 aa
AA seq
DB search
MNKAELIDVLTEKLGTDRRTATAAVEQMVDTIVRAVNKGQSVTITGFGVFEQRKRAARVA
RNPRTGETVKVKPTSVPAFRPGAQFKAIIAGKQKIASSGPAVKRGVAAPVSGGKTTAKKA
AKKTTAKKAATKAPAKTTAKKAASKAPAKKATAKKTVAKKTVAKKTPAKATAKKAPAKKA
AATKATASKATAKKTAKKAPAKKTAAKRTARR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaggcggaactgatcgatgttctgaccgagaagttgggtactgacaggcgcacc
gctactgcagcagtcgagcagatggtcgacacaatcgtgcgtgctgtgaacaaaggtcag
agcgtcaccatcaccggattcggtgtcttcgaacagcgcaagcgcgctgcgcgagtggcc
cgtaacccgcgtaccggtgaaaccgtcaaggtgaagccgacttcggtgccggcattccgt
ccgggcgctcagttcaaggcgatcatcgccggcaagcagaagatcgcctcgagcggcccg
gccgtgaaacgcggtgtggctgccccggtgtcgggcggcaagaccacggccaagaaggcg
gcgaagaagaccaccgccaagaaggccgccaccaaggctccggccaagaccacggcgaag
aaggccgcttcgaaggcgcccgccaagaaggccaccgccaagaagacggtcgcgaagaag
acggtcgccaagaagaccccggccaaggctaccgccaagaaggctccggccaagaaggcc
gccgccaccaaggccaccgcttcgaaggccaccgccaagaagacggccaagaaggctccg
gccaagaagaccgctgccaagcgcaccgcccgtcgctga
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