Nocardia yamanashiensis: LTV02_01400
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Entry
LTV02_01400 CDS
T07935
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nya
Nocardia yamanashiensis
Pathway
nya02024
Quorum sensing
nya03060
Protein export
nya03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LTV02_01400 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LTV02_01400 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LTV02_01400 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nya02044
]
LTV02_01400 (ffh)
Enzymes [BR:
nya01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LTV02_01400 (ffh)
Secretion system [BR:
nya02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LTV02_01400 (ffh)
Eukaryotic Sec-SRP protein
LTV02_01400 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
AAA_22
nSTAND3
Zeta_toxin
AAA_31
APS_kinase
AAA_24
ArsA_ATPase
TctA
AAA_18
NPHP3_N
AAA_16
TsaE
Thymidylate_kin
6PF2K
AAA_33
MobB
hnRNP_Q_AcD
AAA_30
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
UGT42117
LinkDB
All DBs
Position
294062..295630
Genome browser
AA seq
522 aa
AA seq
DB search
MFESLSDRLAGALKDLRGKGRLSPADIDATAREIRLALLEADVALPVVRSFIARVKDRAK
GAEVSQALNPAQQVVKIVNDELVTILGGETRRLQYAKNPPTVIMLAGLQGAGKTTLAGKL
AKWLKGQGHTPLLVACDLQRPGAVTQLQVVGERAGVPVFAPHPGTSIGGGDNPLGISASD
PVDVARAGIEEAKQKQYDVVIVDTAGRLGIDAELMAQAAGIRDAVNPDETLFVLDAMIGQ
DAVSTAEAFRDGVGFTGVVLTKLDGDARGGAALSVREITGQPILFASTGEKLEDFDVFHP
DRMASRILGMGDLLTLIEQAEQVYDAKQAEEAARKIGSGELTLEDFLEQMLAIRKMGPIG
NLLGMLPGAGQMKDVLAQVDDKQLDRVQAIIRGMTPAERDNPKIINASRRLRIANGSGVS
VTDVNQLVDRFFEAKKMMGMMSRQFGMPGARANKGKGKGKKGKKGGRGPTPPKMRGGFPG
MPGLPGGMPAGMPDISNLPAGLNELPPGLEGFDLSKLKFPKQ
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctttccgaccggttggccggtgccctcaaggatctgcgcgggaaggga
cgcctgtcaccggcggatatcgatgccaccgcccgtgagatccggctcgccctgctcgaa
gccgacgtggcgctgcccgtggtgcgcagcttcatcgcccgcgtcaaggaccgcgccaag
ggtgcggaggtctcccaggcgctgaatccggcgcagcaggtcgtcaagatcgtcaacgac
gagctggtcacgattctcggtggcgagacgcggcggctgcagtacgccaagaacccgccg
accgtcatcatgctggccggtctgcagggcgccggtaagaccacgctcgcgggcaagctc
gcgaaatggctgaaggggcaagggcatacgccgctgctcgtcgcgtgtgacctgcagcgt
cccggcgcggtcacccagctgcaggtggtcggtgagcgtgcgggcgtgcccgttttcgcc
ccgcaccccggcacttccatcggcggcggcgacaatccgctcggcatctccgcgtccgat
ccggtcgatgtggcgcgcgccggtatcgaagaggccaagcagaagcagtacgacgtggtc
atcgtcgataccgccggccgcttgggcatcgacgccgaactgatggcgcaggccgcgggc
atccgcgatgccgtcaaccccgacgagaccctgttcgtcctcgacgccatgatcggccag
gatgcggtctccaccgccgaggcgttccgcgacggcgtcggcttcaccggcgtcgtgctc
accaagctcgacggcgacgcccgcggtggtgcggcgctgtcggtgcgtgagatcaccggc
cagcccatccttttcgcgtccaccggcgagaagctggaagacttcgacgtcttccacccc
gaccgcatggcctcgcgcattctcggcatgggcgatctgctcaccctgatcgagcaggcc
gagcaggtctacgacgccaagcaggccgaggaagccgcccgcaagatcggctccggcgag
ctcaccctcgaggacttcctcgagcagatgctggccattcgcaagatgggtcccatcggc
aacctgctcggcatgctgccgggcgcgggccagatgaaggacgtgctggcccaggtcgac
gacaagcagctggaccgggtgcaggccatcattcgcggtatgacgcccgccgagcgcgat
aaccccaagatcatcaacgcttcccgccgcctgcgcatcgccaatggctccggcgtcagc
gtcaccgacgtcaatcagctcgtcgaccgcttcttcgaagccaagaagatgatgggcatg
atgagccgccagttcggcatgcccggcgcgcgcgccaacaagggcaagggcaaaggcaag
aagggcaagaagggcggacgcgggccgaccccgccgaagatgcgcggcggtttcccgggg
atgcccgggctccccggcggtatgccggccggtatgcccgatatctcgaatctgcccgcg
ggcctcaacgaactcccgccggggctggaaggtttcgacctgtcgaaactgaagttcccc
aagcagtag
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