Nocardia yamanashiensis: LTV02_05365
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Entry
LTV02_05365 CDS
T07935
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
nya
Nocardia yamanashiensis
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nya03021
]
LTV02_05365
Transcription machinery [BR:
nya03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LTV02_05365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_3
KORA
HTH_28
MarR_2
GerE
HTH_24
HTH_Crp_2
HTH_37
Motif
Other DBs
NCBI-ProteinID:
UGT42832
LinkDB
All DBs
Position
complement(1137557..1138456)
Genome browser
AA seq
299 aa
AA seq
DB search
MPSEPEARPGPASGRRRGGDSYDNIEPWLDKLASLDADSAEYARLRNEVIGRCLPLGEHI
ARRYAGRGVDFEDLNQIAAVGVVLAVDRFDPSNGATFLAYAIPTIMGEVKRYFRDSTWAV
RVPRRLKELQQRLTTVIPDLSQRLGRQPTARELAEATGAELTEITQALIAANSYTTESLD
TRAAFDDEGDKPLAPVDGLAAADPGYDLIEDSITAGPLLAELPERERTILVMRYGQDKTQ
TEIAAVLGISQMQISRILARVLRELRERALGPAPAAVTACRNHRTGPRRRAAARHSATR
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtgaacccgaagcccggcccggacctgcgagcggacgccgccgtggcggcgat
tcgtacgacaatatcgagccttggctggacaagctcgcaagtctggacgccgacagcgcc
gagtacgcgcgcctgcggaacgaggtcatcggccgctgcctgccgctcggtgagcacatc
gcgcggcgttatgccggacgcggggtggacttcgaggatctgaaccagatcgcggcggtc
ggcgtggtgctggcggtcgaccggttcgatcccagcaatggcgcgaccttcctggcgtac
gccattccgaccatcatgggcgaggtcaaacgctacttccgtgacagcacctgggcggtg
cgagtgccgcgacggctcaaggaactacagcagcggctgaccactgtcatccccgatctg
tcgcaacggctgggccggcagcccaccgcgcgcgaactggccgaggcgaccggcgcggag
ctgaccgagatcacccaggcgctgatcgccgcgaacagttacaccaccgaatccctggac
acccgagcggctttcgacgacgagggcgacaagcccctggcgccggtggacggtctggcg
gccgcggatcccggctacgacctgatcgaggactcgatcaccgccgggccgctgctggcg
gagctgcccgagcgcgagcgcaccatcctggtcatgcgctacggccaggacaagacgcag
acggaaatcgctgcggtgctgggcatttcgcagatgcagatctcgcgcatcctggcccgc
gtgctgcgcgagctgcgggagcgggcgctcgggcccgctccggcggcggtcacagcatgc
cgaaatcatcggacaggcccgcgacggcgagcagccgctcgacacagtgcgacccgatga
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