Nocardia yamanashiensis: LTV02_05880
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Entry
LTV02_05880 CDS
T07935
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
nya
Nocardia yamanashiensis
Pathway
nya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LTV02_05880 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nya03400
]
LTV02_05880 (ruvB)
Enzymes [BR:
nya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LTV02_05880 (ruvB)
DNA repair and recombination proteins [BR:
nya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LTV02_05880 (ruvB)
RecFOR pathway proteins
LTV02_05880 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
TIP49
AAA_5
AAA_16
Mg_chelatase
nSTAND3
AAA_14
Sigma54_activ_2
AAA_3
RNA_helicase
Zeta_toxin
Resolvase
IstB_IS21
AAA_33
Rad17
Motif
Other DBs
NCBI-ProteinID:
UGT42927
LinkDB
All DBs
Position
1236183..1237295
Genome browser
AA seq
370 aa
AA seq
DB search
MIDEPDYGASDFGAPDFDEATVSPVYQQSDGEIEASLRPKSLDDFIGQPRVREQLALVLR
GAKQRGGTPDHVLLSGPPGLGKTSMAMIIAGELGTALRLTSGPALERAGDLAAMLSNLVE
GDVLFIDEIHRMARPAEEMLYLAMEDFRVDVVVGKGPGATSIPLDIAPFTLVGATTRSGA
LTGPLRDRFGFTGHMDFYEPEELQRILLRSAGILGVRIDTDAAAEIAGRSRGTPRIANRL
LRRVRDYAEVKADGLVTKEIAHAALAVYDVDALGLDRLDRAVLSALIRSFNGGPVGVSTL
AVAVGEESATVEEVCEPFLVRAGLIARTPRGRVATAAAWEHLGLVPPPDLVFGSIEVRAR
ESHPGLFDSL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgaacccgattacggcgcctccgacttcggcgcacccgatttcgacgaggcc
acggtcagccccgtctatcagcagtccgacggtgagatcgaggccagtctgcggccgaag
tccctggacgacttcatcggccagccgcgggtgcgcgaacaactcgccctggtgctgcgc
ggcgcgaaacagcgcggcggcactcccgatcacgtattgctgtccggcccaccgggattg
ggcaagacctcgatggcgatgatcatcgcgggggagctgggcaccgcgctgcggctgacc
tccggtccggcgctggaacgcgccggtgacctggcggccatgctgagcaatctggtcgag
ggcgatgtgctgttcatcgacgagatccatcgcatggcacggcccgccgaggaaatgctg
tacctcgccatggaggacttccgggtcgacgtggtggtcggcaaaggcccgggcgcgacg
tcgattcccctcgatatcgccccgttcaccctcgtcggcgcgaccacccgctccggcgcg
ctgaccggtccgctgcgcgaccgcttcggcttcaccgggcatatggatttctacgaaccc
gaagagctgcaacgcattctgctgcgttcggccggcattctcggcgtgcgcattgacacc
gatgccgcggccgagatcgccgggcgctcgcgcgggacgccgcgtatcgccaaccggctg
ctgcgccgggtgcgcgactacgccgaggtgaaggccgacggcctggtcaccaaggagatc
gcgcacgcggcgctggcggtgtacgacgtggacgcgctcggcctggaccggctcgaccgg
gcggtgctgtcggccttgatccgcagcttcaatggcggaccggtcggtgtgtccacgctg
gcggtcgcggtgggcgaggaatcggccaccgtcgaggaggtgtgcgaacccttcctggtg
cgtgcgggtttgatcgcccgcaccccgcgcggccgggtcgccaccgccgccgcctgggag
catctcggcctggtgccgccgccggatttggtgttcgggtccatcgaggtgcgggcgcgc
gaatctcatccgggactgttcgattcgctctga
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