KEGG   Nocardia yamanashiensis: LTV02_09560
Entry
LTV02_09560       CDS       T07935                                 
Name
(GenBank) decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
nya  Nocardia yamanashiensis
Pathway
nya00300  Lysine biosynthesis
nya00470  D-Amino acid metabolism
nya01100  Metabolic pathways
nya01110  Biosynthesis of secondary metabolites
nya01120  Microbial metabolism in diverse environments
nya01230  Biosynthesis of amino acids
Module
nya_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:nya00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LTV02_09560
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LTV02_09560
Enzymes [BR:nya01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     LTV02_09560
SSDB
Motif
Pfam: Orn_Arg_deC_N Ala_racemase_N
Other DBs
NCBI-ProteinID: UGT43602
LinkDB
Position
complement(1992232..1993662)
AA seq 476 aa
MTAAAPPGLPAKIHPLVRAFLDAPGAVEDALKGGSSPAHLVFPQVFAENLERLRTVLEAG
VGRYRICYAHKVNQSRAFVRTAEAAGVGIDVASPEELASAGGAGFAPERIEVTGPKGEGF
LRELVGTGVTISVDNVWELRRVGELAAEFGVVTPVLVRLSGFPGTPVSRFGVPVRQLDEV
LEVLVADRARIGFRGFAFHLDSGEPAERVRAVEACLAATERAYEHGLAPSVLNIGGGFRQ
VFTADADAFDHYVIALREALLGRGEAMAWGGNTFGFHLDGGAVHGTPVFHKYANTVPADR
MLAELLAAGLESQGGREFGQVAAENLLEVWLEPGKALVDHAGITVARVEFLKETADGSLL
ANLDLSRDTVTPADQEVMVDPLLIPARPRTETGATGVFLAGRLCLERDLITNHKVWLPAR
PEPGDLIVFPNTAAYHMDLSAATASMHRLPPKLAVTRERDGFRVCRDGDYQPERGR
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgaccgctgcggcgccgccggggctgccggcgaagatccatccgctggtgcgcgcgttc
ctggatgcgcccggcgcggtcgaggatgcgctcaagggcgggtcgtcgccggcgcatctg
gtgtttccgcaggtgttcgccgagaatctggagcggttgcggacggtgctcgaagcgggt
gtggggcggtatcggatctgctacgcgcacaaggtgaatcagtcgcgggcgttcgtgcgc
acggccgaggcggccggggtcgggatcgatgtggcctcgccggaggaactggccagtgcg
ggcggggcggggttcgcaccggagcggatcgaggtgaccgggcccaagggtgaggggttt
ctgcgggagctggtcgggacgggggtgaccatcagcgtcgacaatgtgtgggaattacgg
agagtgggcgagctggcggcggagttcggggtggtgacgccggtgctggtgcggttgagc
gggtttccggggacgccggtgagccggttcggggtgccggtgcggcagctggacgaggtc
ctggaagtgctggtagcggaccgggcgcggatcgggttccgggggttcgcttttcacctg
gattcgggggaaccggccgagcgggtgcgggcggtggaggcatgtctggcggcgaccgaa
cgcgcctacgagcacgggctcgcgccgtcggtgctcaatatcggcggcgggttccggcag
gtgttcaccgccgacgccgacgccttcgaccactatgtgatcgccttgcgcgaggcgctg
ctgggtcgcggtgaagcgatggcgtggggcggcaataccttcggcttccacctcgacggc
ggcgccgtgcacggcacaccggtgttccacaagtacgccaataccgttcctgccgaccgc
atgctggccgaactcctcgcggccggactggaatcacagggcgggcgcgagttcgggcag
gtggccgccgagaaccttctcgaggtgtggctggagccgggcaaggcgctggtcgatcat
gcgggaatcacggtggcgcgggtggagttcctcaaggagaccgccgacggctcgctgctg
gccaatctggatctcagccgcgacaccgtcaccccggccgatcaggaagtcatggtcgat
ccgctgctgataccggcgcgcccgcgcaccgaaaccggtgcgacgggggtgtttctggcg
gggcggctgtgcctggaacgggatctgatcaccaatcacaaggtgtggttgccggcgcgg
cccgaacccggggatctgatcgtgttccccaataccgctgcctaccatatggatttgtcg
gcagcgaccgcatccatgcatcgactgccgcccaagctggcggtgacgcgcgaacgtgac
gggttccgggtgtgccgggacggggactaccagcccgagcgggggcggtaa

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