Nocardia yamanashiensis: LTV02_09560
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Entry
LTV02_09560 CDS
T07935
Name
(GenBank) decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nya
Nocardia yamanashiensis
Pathway
nya00300
Lysine biosynthesis
nya00470
D-Amino acid metabolism
nya01100
Metabolic pathways
nya01110
Biosynthesis of secondary metabolites
nya01120
Microbial metabolism in diverse environments
nya01230
Biosynthesis of amino acids
Module
nya_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LTV02_09560
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LTV02_09560
Enzymes [BR:
nya01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LTV02_09560
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Motif
Pfam:
Orn_Arg_deC_N
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UGT43602
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All DBs
Position
complement(1992232..1993662)
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AA seq
476 aa
AA seq
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MTAAAPPGLPAKIHPLVRAFLDAPGAVEDALKGGSSPAHLVFPQVFAENLERLRTVLEAG
VGRYRICYAHKVNQSRAFVRTAEAAGVGIDVASPEELASAGGAGFAPERIEVTGPKGEGF
LRELVGTGVTISVDNVWELRRVGELAAEFGVVTPVLVRLSGFPGTPVSRFGVPVRQLDEV
LEVLVADRARIGFRGFAFHLDSGEPAERVRAVEACLAATERAYEHGLAPSVLNIGGGFRQ
VFTADADAFDHYVIALREALLGRGEAMAWGGNTFGFHLDGGAVHGTPVFHKYANTVPADR
MLAELLAAGLESQGGREFGQVAAENLLEVWLEPGKALVDHAGITVARVEFLKETADGSLL
ANLDLSRDTVTPADQEVMVDPLLIPARPRTETGATGVFLAGRLCLERDLITNHKVWLPAR
PEPGDLIVFPNTAAYHMDLSAATASMHRLPPKLAVTRERDGFRVCRDGDYQPERGR
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgcggcgccgccggggctgccggcgaagatccatccgctggtgcgcgcgttc
ctggatgcgcccggcgcggtcgaggatgcgctcaagggcgggtcgtcgccggcgcatctg
gtgtttccgcaggtgttcgccgagaatctggagcggttgcggacggtgctcgaagcgggt
gtggggcggtatcggatctgctacgcgcacaaggtgaatcagtcgcgggcgttcgtgcgc
acggccgaggcggccggggtcgggatcgatgtggcctcgccggaggaactggccagtgcg
ggcggggcggggttcgcaccggagcggatcgaggtgaccgggcccaagggtgaggggttt
ctgcgggagctggtcgggacgggggtgaccatcagcgtcgacaatgtgtgggaattacgg
agagtgggcgagctggcggcggagttcggggtggtgacgccggtgctggtgcggttgagc
gggtttccggggacgccggtgagccggttcggggtgccggtgcggcagctggacgaggtc
ctggaagtgctggtagcggaccgggcgcggatcgggttccgggggttcgcttttcacctg
gattcgggggaaccggccgagcgggtgcgggcggtggaggcatgtctggcggcgaccgaa
cgcgcctacgagcacgggctcgcgccgtcggtgctcaatatcggcggcgggttccggcag
gtgttcaccgccgacgccgacgccttcgaccactatgtgatcgccttgcgcgaggcgctg
ctgggtcgcggtgaagcgatggcgtggggcggcaataccttcggcttccacctcgacggc
ggcgccgtgcacggcacaccggtgttccacaagtacgccaataccgttcctgccgaccgc
atgctggccgaactcctcgcggccggactggaatcacagggcgggcgcgagttcgggcag
gtggccgccgagaaccttctcgaggtgtggctggagccgggcaaggcgctggtcgatcat
gcgggaatcacggtggcgcgggtggagttcctcaaggagaccgccgacggctcgctgctg
gccaatctggatctcagccgcgacaccgtcaccccggccgatcaggaagtcatggtcgat
ccgctgctgataccggcgcgcccgcgcaccgaaaccggtgcgacgggggtgtttctggcg
gggcggctgtgcctggaacgggatctgatcaccaatcacaaggtgtggttgccggcgcgg
cccgaacccggggatctgatcgtgttccccaataccgctgcctaccatatggatttgtcg
gcagcgaccgcatccatgcatcgactgccgcccaagctggcggtgacgcgcgaacgtgac
gggttccgggtgtgccgggacggggactaccagcccgagcgggggcggtaa
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