Nocardia yamanashiensis: LTV02_12205
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Entry
LTV02_12205 CDS
T07935
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase molybdopterin binding subunit
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
nya
Nocardia yamanashiensis
Pathway
nya00230
Purine metabolism
nya01100
Metabolic pathways
nya01120
Microbial metabolism in diverse environments
nya01232
Nucleotide metabolism
Module
nya_M00546
Purine degradation, xanthine => urea
nya_M00958
Adenine ribonucleotide degradation, AMP => Urate
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
LTV02_12205 (xdhB)
Enzymes [BR:
nya01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
LTV02_12205 (xdhB)
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Gene cluster
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Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
LmeA
Motif
Other DBs
NCBI-ProteinID:
UGT44096
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Position
2523740..2526115
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AA seq
791 aa
AA seq
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MSHLSQRPDAPVVGVSMPHESAVLHVTGTALYTDDLVYRTKDVLHAYPVQVMTAHGRITA
LRTAPALAVPGVVRVLTAADVPGVNDAGMKHDEPLFPDEVMFHGHAVAWVLGETLEAARL
GAEAVEVDVQELPALITLPEAMAANSFHGSRPVMVCGDVAAGFADSARVFTGEFQFSDQE
HFYLETHAALAQIDEAGQLFIQSSTQHPSETQEIVAHVLGLASHQVTVQCLRMGGGFGGK
EMQPHGFAAIAALGSQVTGRPVRVRLNRTQDLTMSGKRHGFHATWKIGFDAEGRIQALEA
TLTADGGWSLDLSEPVLARALCHIDNIYWIPHARIAGRIAKTNKVSNTAFRGFGGPQGML
IIEDILGRCAPLLGLDPAELRERNFYRPGQHTPYGQPVRNPERIAATWQQVTKDAALADR
RREIAAFNAAHAHTKRGLAITGVKFGISFNLTAFNQGGALVLIYKDGSVLINHGGTEMGQ
GLHTKMLQVAATSLGIPLHRVRLAPTRTDKVPNTSATAASSGADLNGAAVKNACEQLRER
LLAVAGARLGVDPAEVRIADGVARVRGGDGRLAWDDLVRTAYLERIQLSAAGFYRTEGLH
WDARSFQGSPFKYFSYGAAATEVEVDGFTGAYRIRRVDIVHDVGDSLSPLIDLGQIEGGF
VQGAGWLTLEELRWDTGSGPRRGRLLTQAASTYKLPSFSEMPEVFNVTLLENATEEGAVY
GSKAVGEPPLMLAFSVREALRQAAAAFGPAGVAVDLASPATPEAVYWAVEAARRTAGRSE
SSTGASTSISV
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagccatctgtcccagcggccggacgcccccgtcgtcggcgtctccatgccgcacgag
agcgccgtcctccatgtcaccggaaccgcgctctacaccgacgatctggtctatcgcacc
aaggatgtgctgcacgcctacccggtgcaggtcatgaccgcccacggccggatcaccgcg
ctgcgcaccgcgcccgcgctggccgtgcccggtgtggtgcgggtgctcaccgccgccgac
gtgcccggcgtcaacgatgccggcatgaagcacgacgagccgctgttcccggacgaggtc
atgttccacggccacgccgtcgcctgggtgctgggcgaaacgctggaggcggcccggctg
ggcgcggaagcggtagaggtggacgtgcaggagctgcccgcgctgatcacgctgccggag
gcgatggcggccaacagttttcacggcagccgcccggtcatggtgtgcggcgacgtggcg
gccggattcgccgattcggcccgggtgttcaccggggagttccagttctccgatcaggag
catttctacctcgagacgcatgcggcgctggcgcagatcgacgaggccgggcagctgttc
atccagagcagcacccagcatccctccgagacccaggagatcgtcgcgcacgtcctcgga
ctggccagccaccaggtgacggtgcagtgcctgcgcatgggcggcggtttcggcggtaag
gagatgcagccgcacgggttcgcggcgatcgccgcgctcggctcccaggtgacgggccgg
ccggtgcgagtgcggctcaaccggactcaggacctgactatgtccggcaagcggcacggc
ttccacgccacctggaagatcggcttcgatgccgagggccgcatccaggcgctggaggcc
accctcaccgcggacggcggctggagcctggatctgtccgagcccgtgctggcccgcgcg
ctgtgccatatcgacaacatctattggattccgcacgcgcgcatcgccggtcgcatcgcc
aagaccaacaaggtgtccaacaccgccttccgcggcttcggcggaccgcagggcatgttg
atcatcgaggacatcctgggcaggtgcgcgccgctgctgggcctggacccggcggagttg
cgcgagcgcaacttctaccggcccgggcagcacacgccgtacgggcagccggtgcgcaat
ccggaacggatcgcggccacctggcagcaggtcacgaaggacgccgccctcgccgatcgc
cgccgggagatcgcggcgttcaatgccgcccacgcccacaccaagcgcggcctggcgatc
accggcgtcaagttcggcatatcgttcaacctcaccgccttcaatcagggcggcgcgctg
gtgctgatctacaaggacgggtcggtcctgatcaaccacggcggcaccgagatgggccag
ggtctgcacacgaaaatgctgcaggtggccgcgaccagcctgggcattccgctgcaccgg
gtgcggttggcgccgacccgaaccgacaaggtgcccaatacttccgccaccgccgccagt
tccggggcggacctcaacggcgcggccgtgaagaacgcctgcgagcagctgcgcgagcga
ctgctggcggtggcgggcgcccggctcggggtggacccggcggaggtgcgcatcgccgac
ggcgtcgcccgcgtccgcggcggcgacggccggctcgcgtgggacgatctcgttcgcacc
gcctatctcgagcgaattcagttgtcggcggccggtttctaccgcaccgagggcttgcac
tgggacgcgcggtccttccagggatcgccgttcaagtacttctcctacggcgcggccgcc
accgaggtggaggtggacggcttcaccggcgcctaccgcatccggcgcgtcgatatcgtg
cacgatgtcggcgacagcctctccccgctgatcgacctcggccagatcgaaggcggattc
gtgcagggtgcgggctggctgaccctggaggaactgcggtgggacaccggctccggaccc
cgccgcggccggttgctgacgcaggcggccagtacctacaagttgccgagcttctcggaa
atgcccgaggtcttcaatgtgacgttgctggagaacgcgaccgaggagggcgcggtgtac
gggtccaaggcggtgggagagccgccgctgatgctggcgttctcggtgcgcgaggcattg
cggcaggccgccgcggcgttcgggcccgcgggcgtggcggtggatctcgcctcccccgcg
acgccggaggcggtgtactgggcggtcgaggcggcacggcgcaccgccgggcgcagtgaa
agcagcaccggcgcaagcacatcgatcagtgtctga
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