Nocardia yamanashiensis: LTV02_13450
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Entry
LTV02_13450 CDS
T07935
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
nya
Nocardia yamanashiensis
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
nya03051
]
LTV02_13450 (pafA)
Enzymes [BR:
nya01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
LTV02_13450 (pafA)
Proteasome [BR:
nya03051
]
Prokaryotic proteasome
Bacterial regulatory particles
LTV02_13450 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
UGT44332
LinkDB
All DBs
Position
complement(2762003..2763361)
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AA seq
452 aa
AA seq
DB search
MQRRIMGIETEFGVTCTFHGHRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATAECDSLVQLVTHDRAGERVLEDLLIDAEQRLAEEGIGGDIYLFKNNTDSAGNSY
GCHENFLVVRAGEFSRISDVLLPFLVTRQLICGAGKVLQTPKAATFCLSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAEKYRRLHVIVGDSNMAEPTTMLKVGTASLVLEMIEAGVAF
RDFALDNPIRAIREVSHDLTGRRPVRLAGGRQASALDIQREYYARAVEHLNNRDRDPQVD
AVVDLWGRTLDAVEAQDFAKVDTEIDWIIKRKLFQRYQDRYNMELSDPKIAQLDLAYHDI
KRGRGVFDLLQRKGLAKRVTEDEAVDAAVTTPPQTTRAKLRGDFITAAQEAGRDFTVDWV
HLKLNDQAQRTVLCKDPFRSVDERVDRLIASM
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcgacgaatcatggggatcgaaaccgaattcggggtgacgtgcaccttccacggt
caccgtcggttgagtcctgacgaggtggcccggtatctattccgccgggtagtttcttgg
ggccgtagttccaacgtgttcctccgtaatggcgcccggctctacctcgatgtcggttcc
catccggagtacgcgacggccgagtgcgacagcctggtgcagctggtgacgcacgaccgc
gcgggcgagcgggtcctcgaggatctgctcatcgacgccgaacagcgtctcgccgaagag
ggtatcggcggcgacatctacctgttcaagaacaacacggactcggcgggcaactcctac
ggctgccacgagaacttcctcgtggtccgcgccggtgagttctcccgcatctccgatgtg
ctgttgcccttcctggtgacccggcagttgatctgcggcgccgggaaggtgctgcagacg
cccaaggcggcgaccttctgcctctcgcagcgggccgagcacatctgggaaggcgtctcc
tcggcgaccacccggtcccggccgatcatcaatacgcgtgacgagccgcacgccgacgcc
gagaagtaccggcgcctgcacgtcatcgtcggcgactcgaacatggccgagccgaccacc
atgctcaaggtgggcacggcctcgctggtgctcgagatgatcgaggcgggcgtggcgttc
cgggatttcgccctggacaacccgattcgggcgatccgcgaggtctcgcacgatctgacc
ggtcgccgcccggtgcggctggctggcggacggcaggccagcgccctcgacatccagcgc
gagtactacgcccgcgccgtcgagcacctgaacaatcgcgatcgcgatccgcaggtcgac
gcggtggtggacctgtggggccgcaccctggacgcggtcgaggcgcaggacttcgccaag
gtggacaccgagatcgactggatcatcaagcgcaagctgttccagcgctaccaggaccgc
tacaacatggagctgtccgatcccaagatcgcccagctggatctggcctaccacgacatc
aagcgcggccgcggcgtcttcgacctgctgcagcgcaagggtctggccaagcgggtcacc
gaggacgaggcggtcgatgccgcggtcaccacgccgccgcagaccacccgggccaagctg
cgcggcgatttcatcaccgccgctcaggaggccggacgcgacttcaccgtcgactgggtg
cacctcaagctcaacgatcaggcgcagcgcacggtcctgtgcaaggacccgttccgttcg
gtcgacgagcgcgtggaccggctcatcgcctccatgtag
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