Nocardia yamanashiensis: LTV02_16490
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Entry
LTV02_16490 CDS
T07935
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
nya
Nocardia yamanashiensis
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nya03400
]
LTV02_16490
Enzymes [BR:
nya01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LTV02_16490
DNA repair and recombination proteins [BR:
nya03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LTV02_16490
Prokaryotic type
LTV02_16490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
HTH_33
Motif
Other DBs
NCBI-ProteinID:
UGT44894
LinkDB
All DBs
Position
complement(3420322..3421647)
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AA seq
441 aa
AA seq
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MTASIALFTRDLRVHDNPALTAACADGDAVVPLFVLDTELLDKVRHAPNRMRFLVAALSE
LDAELRSRGGRLIVRRGRIAEVVAQVAREVRAHRVHLAADVTSYSVERSAALRDRLAEIR
CDLRPHPASITAVDATALRPDTGRTHYAIFTPYFRRWLDTPMRRPLAAPKALTVPAVESV
EIPAPGELCADPGSPSLAVGGETTGRKLLAQWLSGPVRQYEATKDLPAHDGTSGLSPYLH
FGCLSAAEIVHRTDAADPGGLAFVRQIAWRDFYHQVLADRPEVAVEDYRPAFEPWQRDPH
AVAAWKAGRTGLPMVDAGMRQLTEQGWMPGRARLIAASFLVKTLRIDWRIGARHFERWLV
DGDIANNRMNWQWMAGTGTDTRSSRVLNPLRQAERFDPDGDYVRRWLPELAGLPGAEIHR
PWRAGMLSGDYPPPIVEFNGM
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcatccatcgcactgttcacccgagacctgcgcgtgcacgacaacccggcgctg
acggccgcctgcgcggacggtgacgcggtggtgccgctgttcgtgctcgataccgaactg
ctcgacaaggtccgccacgcgccgaaccggatgcgattcctcgtcgccgccctgtccgaa
ctcgatgccgaactgcggtcgcgcggcgggcggctgatcgtgcggcgcggccggatcgcc
gaggtggtcgcccaggtcgcgcgcgaggtgcgagcgcaccgggtgcacctggcggccgac
gtcaccagctacagcgtggaacgctcggcggcgctgcgggaccggctcgccgagatccgc
tgcgacctgcgcccgcacccggcatcgatcaccgcggtcgatgcgaccgcgctccgtccg
gacaccggccgcacccattacgcgatcttcaccccgtacttccgccgctggctcgatacg
cccatgcgccggccgctcgccgccccgaaagcgctgaccgtgccggctgtcgagagcgtg
gagatccccgctcccggcgaactgtgcgccgatcccggttccccgtcgctggccgtcggc
ggcgagaccaccggccggaaactgctcgcgcagtggctgtccggtcccgtgcggcagtac
gaggcgaccaaggacctgcccgcgcacgacggcacctccggtctgtcgccctacctgcac
ttcggctgcctgtccgccgcggagatcgtccaccgcaccgacgctgccgatccgggcggg
ctcgccttcgtccggcagatcgcctggcgcgacttctatcaccaggtcctggccgatcgc
cccgaagtcgccgtcgaggactaccggcccgcgttcgaaccgtggcagcgcgatccgcac
gcggtcgccgcctggaaagcgggccgcaccggcctgcccatggtcgacgcgggcatgcgc
caactcacggagcagggctggatgccgggacgggcgcggttgatcgcggccagcttcctg
gtcaagaccctgcgcatcgattggcgtatcggcgcccggcatttcgaacgctggctggtg
gacggcgatatcgccaacaatcggatgaactggcagtggatggccggcaccggcaccgac
acccgctccagccgggtgctcaatccgctgcggcaggccgaacgcttcgatccggacggc
gattacgtacggcgctggctgccggagctcgccgggctgccgggcgcggagatccaccgg
ccgtggcgggcgggcatgctgagcggtgactatccgccgccgatcgtcgaattcaacggt
atgtga
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