Nocardia yamanashiensis: LTV02_22000
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Entry
LTV02_22000 CDS
T07935
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nya
Nocardia yamanashiensis
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nya03016
]
LTV02_22000
Enzymes [BR:
nya01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LTV02_22000
Transfer RNA biogenesis [BR:
nya03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LTV02_22000
Prokaryotic type
LTV02_22000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
UGT38792
LinkDB
All DBs
Position
complement(4647316..4648233)
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AA seq
305 aa
AA seq
DB search
MSQRELVILGTASQVPTKQRNHNGYLLRWDREGLLFDPGEGTQRQMSFAGVAASGITRIG
ITHFHGDHCFGLPGVLGRINLDGALHPVDVYFPASGEIFYERLVDSSAHNRRVELLPHPI
TENGELPAPGADFSLRAARLSHPVEAFGYRLDEPDGIRFIPERLRELGLAGPVVGKLQRD
GRVEIDGRVITLDEVSEPRPGQSFAFIMDTRLCDGVYDLAQNVDMLVIEATFSDADEELA
VEYGHLTAGQAASVAAKAGARLLVLTHFSQRYRTLDQHLADARAQFDGEIVVAEDLMRIP
VPARR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtgtcacagcgcgaactggtcatcctcgggacagccagccaagtaccgaccaagcagcgc
aatcacaatggttatctgctgcgctgggatcgggagggtctcctcttcgatccgggtgag
ggcacccagcggcagatgagtttcgccggcgtggcggccagcgggatcacccggatcggg
atcacgcatttccacggcgaccactgtttcgggctgccgggcgtgctcgggcgcatcaat
ctggatggggccctgcatccggtcgacgtgtatttcccggcctcgggggagatcttctac
gaacggctggtcgactcctccgcgcacaatcgccgggtcgaattgctgccgcatccgatc
accgagaacggtgaactgcctgcgcccggagccgatttcagcctgcgggcggcgcggctg
tcgcatcccgtcgaagcgttcggctaccggctcgacgaacccgacggcattcgattcatt
ccggaacggctgcgcgaactggggctggccgggccggtggtgggcaagctgcagcgggac
ggccgagtcgaaatcgacgggcgggtaatcactctcgacgaggtcagcgaaccccggccc
ggacagagcttcgcgttcatcatggacacccggctctgcgacggcgtgtacgacctggcg
cagaacgtggacatgctggtcatcgaggccactttcagcgatgccgacgaggaactcgcc
gtcgaatacgggcatctcaccgccgggcaggcggcctcggtggcggccaaggcgggcgcg
cggctgctcgtgctcacccacttctcgcagcgctaccgcaccctggaccagcatctggcc
gatgcccgcgcgcagttcgacggggagatcgtggtcgcggaagacctcatgcgaattccg
gttccggcccggcgctga
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