Nocardia yamanashiensis: LTV02_25425
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Entry
LTV02_25425 CDS
T07935
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nya
Nocardia yamanashiensis
Pathway
nya00300
Lysine biosynthesis
nya00470
D-Amino acid metabolism
nya01100
Metabolic pathways
nya01110
Biosynthesis of secondary metabolites
nya01120
Microbial metabolism in diverse environments
nya01230
Biosynthesis of amino acids
Module
nya_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LTV02_25425 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LTV02_25425 (lysA)
Enzymes [BR:
nya01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LTV02_25425 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
PRC
Motif
Other DBs
NCBI-ProteinID:
UGT39402
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All DBs
Position
complement(5406092..5407513)
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AA seq
473 aa
AA seq
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MSAHPAGPRHADIPHAPGLPERPADPKQMIELPANVWPRNASRDQDGVVLFAGVPVHELA
AEYGTPLFVIDEDDFRSRCRDMVRAFGEGSRVHYASKAFLCGEIARWIRDEGLHLDVCSA
GELSVALHAGFPAERIALHGNNKSVPELELAVERGVGHVVLDSMIEIERLDTVAKRAGRV
QDVLVRVTVGVEAHTHEYISTAHEDQKFGFSIASGDAMQAIARVFESDNLRLVGLHSHIG
SQIFEIDGFEISTRRMLGVLREVADKFGAERAAQVHILDLGGGLGISYLPHEDPPALDDF
AANLRRIVAEEAERAGLPVPTIAVEPGRAIAGPGTVTLYEVGTIKDVVLDGGNRRRYVSV
DGGMSDNIRPALYQAEYDCRLVSRSSDSGPVVARVVGKHCESGDIVIRDTWLPADVGPGD
LVAVAATGAYCYSMSSRYNLLTRPAVVAVRDGKARLILRRETVEDLLSLEVNA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccaccccgccggtccccgtcacgcggacatcccgcacgccccgggtctgccg
gagcgtcccgccgatccgaagcagatgatcgagctgcccgcgaatgtgtggccgcgcaac
gcatcccgcgatcaggacggcgtcgtgctgttcgcgggcgtgccggtgcacgagctggcc
gccgaatacggcaccccgctgttcgtcatcgacgaggacgacttccgttcccgctgccgc
gatatggtgcgcgccttcggcgagggctcgcgagtccactacgcctccaaggctttcctg
tgcggcgagatcgcccgctggatccgcgacgagggcctgcacctggacgtgtgctccgcc
ggcgagctgtcggtggcgctgcacgccgggttcccggccgagcggatcgccctgcacggc
aacaacaaatcggtgccggagctggagctggcggtcgagcgcggcgtcgggcacgtggtg
ctggactccatgatcgagatcgagcgcctggacaccgtcgccaagcgcgccggccgggtg
caggacgtgctggtccgggtcaccgtcggcgtggaagcccatacccacgaatacatctcg
accgcgcacgaggatcagaagttcggcttctcgatcgccagcggcgatgccatgcaggcc
atcgcccgggtcttcgagtccgacaatctgcgcctggtcgggctgcactcgcacatcggc
tcgcagatcttcgagatcgacggcttcgagatctccacccgccgcatgctgggggtgctg
cgcgaggtcgccgacaagttcggcgccgaacgcgccgcgcaggtgcacattctggatctc
ggtggcggcctgggtatttcgtacctgccgcacgaggatccgccggccctggacgacttc
gccgccaatctgcgccgcatcgtcgccgaggaggccgagcgcgcgggactgccggtcccg
accatcgccgtcgagccgggccgcgccatcgcgggtccgggcaccgtgaccttgtacgag
gtcggcaccatcaaagatgttgtgctcgacgggggtaatcgccgacgctatgtcagcgtc
gacggcggcatgagcgacaacattcgccctgccctgtatcaagcggagtacgactgccga
ttggtttcgcggagtagcgattccggtccggtggtcgcacgagtcgtcggaaagcattgc
gagagcggggatatcgtcattcgcgatacctggctccccgccgatgtgggccccggcgac
ctggtggcggtggccgcgaccggcgcgtactgctactcgatgtcgagccgctacaacctg
ctcacccggcccgccgtggtcgctgtgcgggatggcaaggcgcgcttgattcttcgccgt
gaaacggtggaggacctactgagcttggaggtgaacgcatga
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