Nocardia yamanashiensis: LTV02_26050
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Entry
LTV02_26050 CDS
T07935
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nya
Nocardia yamanashiensis
Pathway
nya00020
Citrate cycle (TCA cycle)
nya00190
Oxidative phosphorylation
nya00650
Butanoate metabolism
nya00720
Other carbon fixation pathways
nya01100
Metabolic pathways
nya01110
Biosynthesis of secondary metabolites
nya01120
Microbial metabolism in diverse environments
nya01200
Carbon metabolism
Module
nya_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nya_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nya_M00149
Succinate dehydrogenase, prokaryotes
nya_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LTV02_26050 (sdhA)
00650 Butanoate metabolism
LTV02_26050 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
LTV02_26050 (sdhA)
00720 Other carbon fixation pathways
LTV02_26050 (sdhA)
Enzymes [BR:
nya01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LTV02_26050 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
HI0933_like
DAO
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
UGT45846
LinkDB
All DBs
Position
5534853..5536604
Genome browser
AA seq
583 aa
AA seq
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MQEHRYDVVIVGAGGAGMRAAIEAGPRVRTAVLTKLYPTRSHTGAAQGGMCAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEIMAKEAIDAVLDLEKMGLPFNRTPEGKIDQRRFGGHT
RDHGKAPVRRACYAADRTGHMILQTLYQNCVKHDVEFFNEFYVLDLILTEGSNGPIATGV
VAYELATGELHVFHAKSIVFATGGSGRMYKTTSNAHTLTGDGMAIVFRKGLPLEDMEFHQ
FHPTGLAGLGILISEAVRGEGGILRNASGERFMERYAPTIKDLAPRDIVARSMVLEVREG
RGAGPNKDYVLIDVTHLGEDVLEEKLPDITEFSRTYLGVDPVKEPVPVMPTCHYVMGGIP
TRIRGEVLRNNTDIVPGLYAAGECACVSVHGANRLGTNSLLDINVFGRRAGIAAAEYAQR
AEFVDMPENPAQMVQDWLAGLLSDHGNERVADIRTDLQNSMDDKAGVYRTEESLKSMLEE
IQVLKERYSRITVQDKGRRYNSDLLEAVELGFLLELAEVTVAGAVNRKESRGGHAREDYP
DRDDVNFMRHTMAYKTSPELISEIRLDYKPVVQTRYEPMERKY
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
attcaggagcaccgctacgacgtcgtcatcgtcggtgccggtggcgctggaatgcgtgcg
gcgatcgaggccggtcctcgggtgcgcaccgccgtcctgaccaagctctaccccacccgt
tctcacaccggtgcggcgcagggcggcatgtgcgccgcgctcgcgaacgtcgaagaggac
aactgggagtggcacaccttcgacaccgtcaagggtggcgactacctggtggaccaggac
gccgcggagatcatggccaaggaggccatcgatgccgtgctcgatctggagaagatgggc
ctgccgttcaaccgcacgcccgaaggcaagatcgaccagcggcgcttcggcggccacacc
cgtgaccacggcaaggcgcccgtgcggcgcgcgtgctacgcggccgaccgcaccggccac
atgatcctgcagacgctgtaccagaactgcgtcaagcacgacgtggagttcttcaacgag
ttctacgtgctcgacctgatcctcaccgagggctccaacggcccgatcgcgaccggtgtg
gtggcctacgagctggcgaccggcgagctgcacgtcttccacgcgaagtcgatcgtgttc
gccaccggcggctcgggccgcatgtacaagaccacctccaatgcccacaccctcaccggt
gacggcatggcgatcgtgttccgcaagggcctgcccctggaggacatggagttccaccaa
ttccatccgacaggtctggcgggcctgggcatcctcatctccgaggcggtccgcggcgag
ggcggcattctgcgcaatgcctccggcgagcgcttcatggagcgctacgcgccgaccatc
aaggacctggcgccgcgtgacatcgtcgcgcgctccatggtgctcgaggtgcgcgagggc
cgtggcgcgggtccgaacaaggactacgtgctcatcgacgtgacccacctcggcgaggat
gtcctggaggagaagctcccggacatcaccgagttctcccgcacctacctgggcgtggac
ccggtcaaggagccggtgccggtcatgccgacctgtcactacgtgatgggtggcatcccg
acccgcatccgcggcgaggtgctgcgcaacaacaccgatatcgtcccgggcctgtacgcc
gccggtgagtgcgcctgtgtctccgtgcacggcgccaaccgtctcggcaccaactcgctg
ctcgacatcaacgtgttcggccgtcgcgccggcatcgcggccgccgagtacgcgcagcgc
gccgagttcgtcgacatgccggagaacccggcgcagatggtgcaggactggctggccggt
ctgctctcggatcacggcaacgagcgcgtcgccgacatccgcaccgatctgcagaactcc
atggacgacaaggccggtgtgtaccgcaccgaggagtcgctgaagtccatgctcgaggag
atccaggtgctcaaggagcgctactcgcggatcaccgtgcaggacaagggccgtcgctac
aacagcgacctgctggaggccgtcgagctcggcttcctgctggagctggccgaggtgacg
gtggcgggcgcggtgaaccgcaaggaatcgcgcggcggccacgcccgcgaggactacccg
gatcgcgacgacgtcaacttcatgcgccacaccatggcgtacaagacgagcccggagctc
atctccgaaatccgtctcgactacaagccggtcgtgcagacccgttacgagccgatggag
cgtaagtactga
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