Nocardia yamanashiensis: LTV02_30465
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Entry
LTV02_30465 CDS
T07935
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
nya
Nocardia yamanashiensis
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nya03400
]
LTV02_30465
DNA repair and recombination proteins [BR:
nya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
LTV02_30465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
UGT40312
LinkDB
All DBs
Position
6599052..6599459
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AA seq
135 aa
AA seq
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MSGGRPVTDAATSARMAKQRRVGTKPELALRRELHRRGKRFFVDRAPIPGMRRRADIVFP
RRKVAVYVDGCFWHSCPDHATFPKNNAEWWAAKLAGNVARDRDTDARLIAAGWTVVRIWE
HERPDTAADLVTDAL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgggcgaccggtcaccgacgcggcgaccagtgcgcgcatggccaagcagcgg
cgcgtggggaccaagccagagctcgcgctgcgccgggagctgcatcggcggggcaagcgg
ttcttcgtggatcgcgccccgattccgggcatgcggcggcgggcggacatcgtgttcccg
cgccgcaaggtcgcggtctacgtggacggctgtttctggcacagctgcccggaccacgcg
acgttcccgaagaacaatgccgaatggtgggcggcgaagctggcgggaaatgtggcccgc
gatcgcgataccgatgcccggctgatcgccgccgggtggaccgtggtgcggatctgggag
cacgagcggccggataccgccgccgacctggtgaccgacgcgctgtga
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