Nocardia yamanashiensis: LTV02_31495
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Entry
LTV02_31495 CDS
T07935
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nya
Nocardia yamanashiensis
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nya03032
]
LTV02_31495 (gyrB)
03400 DNA repair and recombination proteins [BR:
nya03400
]
LTV02_31495 (gyrB)
Enzymes [BR:
nya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LTV02_31495 (gyrB)
DNA replication proteins [BR:
nya03032
]
Prokaryotic type
DNA Topoisomerases
LTV02_31495 (gyrB)
DNA repair and recombination proteins [BR:
nya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LTV02_31495 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
UGT40488
LinkDB
All DBs
Position
complement(6830698..6832731)
Genome browser
AA seq
677 aa
AA seq
DB search
MDSNEDGATQSKSGNYDASSITVLEGLEAVRKRPGMYIGSTGERGLHHLVWEVVDNSVDE
AMAGYASRVDVTLLADGGVEVVDDGRGIPTGMHAQGIPTIEVVMTQLHAGGKFDSDSYAV
SGGLHGVGISVVNALSTRLEAEVDHAGYHWTQEYKDAKPGKLVQGEPTKRTGTTIRFWAD
PEIFETTTYNFETVARRLQEMAFLNKGLTITLTDQRVSEGDITDEVVSDTAEAPKHLDEN
APAAEPKVKTRTYHYPGGLEDYVKHINRTKTPIHNSIVGFTGKGTGHELEVAMQWNSGYS
ESVHTFANTINTHEGGTHEEGFRAALTTVVNKYAKDKKLLKEKEGNLTGDDIREGLAAIV
SVKVADPQFEGQTKTKLGNTDVKGFVQRTCNEHLTHWFEANPADAKTIVQKAVSSAQARV
AARKARELVRRKSATDLGGLPGKLADCRSKDPSKSEIYIVEGDSAGGSAKSGRDSMYQAI
LPLRGKIINVEKARIDRVLKNTEVQSIITAFGTGIHDEFDIAKLRYHKIVLMADADVDGQ
HISTLLLTLLFRFMRPLVEHGHVYLAMPPLYKLKWQRSEPEFAYSDRERDGLLERGLAAG
KKINKDDGIQRYKGLGEMNPKELWETTMDPSVRVLRLVTLDDAAAADELFSILMGEDVEA
RRSFITRNAKDVRFLDV
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggactccaacgaagacggcgcgacccagtcgaagtcaggcaattacgacgcctcctcc
attaccgtgctcgagggcctcgaggcggtgcgcaagcgtcccggtatgtacatcggttcc
accggtgagcggggcttgcaccacctggtctgggaggtcgtcgacaactccgtcgacgag
gcgatggccggctacgcctcacgggtcgacgtgaccctgctcgccgacggcggcgtcgag
gtcgtcgacgacggtcgcggtatccccaccggcatgcacgcccagggcatccccaccatc
gaggtggtcatgacccagctgcacgccggcggcaagttcgactccgactcctacgcggtg
tccggcggtctgcacggcgtcggcatctccgtggtgaacgcgctctccacccgcctcgag
gccgaggtggaccacgcgggctaccactggacccaggagtacaaggacgccaagcccggc
aagctcgtccagggcgagcccaccaagcggaccggtaccaccatccgcttctgggccgac
ccggagatcttcgagacaaccacctacaacttcgagacggtcgcgcgccgcctgcaggag
atggcgttcctgaacaagggactcaccatcaccctgaccgatcagcgggtgagcgaaggc
gacatcaccgacgaggtggtgagcgataccgccgaggcgcccaagcacctcgacgagaac
gccccggccgccgagccgaaggtgaagacccggacctaccactacccgggcggtctcgag
gactacgtcaagcacatcaaccggaccaagaccccgatccacaattcgatcgtgggcttc
accggcaagggcaccgggcacgagctcgaggtggccatgcagtggaactcgggttactcc
gagtccgtgcacaccttcgccaacaccatcaacacccacgagggcggcacccacgaagag
ggcttccgcgccgcgctcaccacggtggtgaacaaatacgcgaaggacaagaagctcctc
aaggagaaggaaggcaacctgacgggtgacgacatccgtgagggcctggccgctatcgtc
tcggtgaaggtcgccgacccgcagttcgagggtcagaccaagaccaagctcggcaatacc
gatgtgaaggggttcgtgcagcgcacctgcaacgagcacctgacgcactggttcgaggcc
aacccggccgatgcgaagaccattgtgcagaaggcggtttcgtccgctcaggcgcgagtg
gccgcgcgtaaggcgcgagagctggtgcggcgcaagagcgctaccgatctgggcggcctg
cccggcaagctcgccgactgccggtccaaggatccgagcaagtccgagatctacatcgtg
gagggcgactccgccggtggttcggccaagtccggccgcgactcgatgtatcaggcgatc
ctgccgctgcgcggcaagatcatcaatgtcgagaaggcgcgcatcgaccgcgtgctgaag
aacaccgaagtccagtccatcatcacggctttcggcaccggcatccacgacgagttcgat
atcgccaagctgcggtatcacaagatcgtgctgatggccgacgccgacgtggacggccag
cacatctcgacgctgctgctcaccctgctgttccgcttcatgcggccgctggtcgagcac
gggcacgtgtatctcgccatgccgccgctgtacaagctcaagtggcagcggtccgagccg
gagttcgcgtactccgaccgcgagcgcgacgggctgctggagcgcggcctggcggccggc
aagaagatcaacaaggacgacggcatccagcgctacaagggtctcggtgagatgaacccg
aaggagctgtgggagaccacgatggacccgagcgtccgcgtgcttcgcctggtcactctc
gatgacgccgccgcggcggacgaactgttctccatcctcatgggtgaggacgtcgaggcg
cgccgcagcttcatcacccggaacgccaaggacgtgcggttcctcgacgtgtag
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