Nocardia yamanashiensis: LTV02_35485
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Entry
LTV02_35485 CDS
T07935
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
nya
Nocardia yamanashiensis
Pathway
nya03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LTV02_35485 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nya03400
]
LTV02_35485 (uvrA)
DNA repair and recombination proteins [BR:
nya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LTV02_35485 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LTV02_35485 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
AAA_29
SMC_N
AAA_21
RsgA_GTPase
AAA_25
nSTAND1
AAA_16
AAA_22
NACHT
DnaJ_CXXCXGXG
ExoX-like_C
Viral_helicase1
HC2
cobW
Motif
Other DBs
NCBI-ProteinID:
UGT41189
LinkDB
All DBs
Position
7708641..7711697
Genome browser
AA seq
1018 aa
AA seq
DB search
MADRLTVRGAREHNLKGVDLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSA
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEVYDYLRLLFARAGIPH
CPTCGHLIEKQTPQQIVDQVLAMEEGIKFQVLAPVVRTRKGEFVDLFDQLHSQGYSRVRV
DGVVYPLTDPPKLKKQEKHDVEVVVDRLAVKPSSKQRLTDSIETALRLADGIVVLDFVDR
DEHAHDRERRFSERLACPNGHPLDIEDLEPRSFSFNSPYGACPDCTGLGIRKEVDPDLVV
PDPELSLADGAIAPWSRGQTAEYFTRLLSGLAEAIGFSMDTPWQDLPAKARKAVLEGSSE
QVHVSYTNRYGRKRSYYADFEGVMPFLQRRMDATESEAMKEHYDGYMRDIPCPVCNGARL
RPEILAVTLASRGGHKSIAELSDLSIGEAADFLNSLTLDERQAAIAAQVIKEIQARLGFL
LDVGLQYLTLSRAAATLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIET
LTRLKSLGNTLIVVEHDEDTIHASDWVVDIGPLAGEHGGQVVYSGPYEGLLKDQRSLTGA
YLSGRERIEVPMVRRPLDKKKQLTVVGAVEHNLRGIDVSFPLGVLTAVTGVSGSGKSTLV
NDILATVLANKLNGARQVPGRHTRVNGLDHLDKLVQVDQSPIGRTPRSNPATYTGVFDKI
RTLFAATTEAKVRGYQPGRFSFNVKGGRCEACSGDGTLKIEMNFLPDVYVPCEVCHGARY
NRETLEVHYKGKTIAEVLDMPIEEAADFFEPVTSIHRYLKTLVDVGLGYVRLGQSAPTLS
GGEAQRVKLAAELQKRSTGRTVYILDEPTTGLHFEDIRKLLTVINGLVDKGNTVIVIEHN
LDVIKTSDWVIDMGPEGGSGGGMVIAQGTPEDVAAVAESYTGQFLKEVLAAGEATAPKAP
AKKAVAKKAAAKPTVAASANGSTAKKSTAKKVAAPKDPDQAAAAKKAAAARRKAAALR
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
gtggcggatcgccttacggtgcgcggagcacgggagcacaacctcaaaggggtcgatctc
gacctaccccgtgacagcctcatcgtattcaccggtttgtccgggtcgggcaaatcctcg
ctggccttcgacaccattttcgcggaaggccagcgccgctacgtcgaatcgctgtccgcc
tacgcgcgccagttcctcgggcagatggacaagccggacgtggacttcatcgagggcctg
tctccggcggtgtccatcgaccagaagtcgaccaaccgcaatccgcgctccacggtcggc
accatcaccgaggtctacgactatctgcgcctgctgttcgcgcgcgcgggcattccgcac
tgcccgacctgtggtcacctcatcgagaagcagaccccgcagcagatcgtggaccaggtg
ctcgccatggaggagggcatcaagttccaggtgctcgcgccggtggtgcgcacccgcaag
ggcgaattcgtcgatctcttcgaccagctgcactcgcagggctactcccgcgtccgggtg
gacggcgtggtgtatccgctgaccgacccgcccaagctgaagaagcaggagaagcacgat
gtcgaggtggtcgtggaccgcctcgccgtgaagcccagttccaaacagcgcctgacggat
tcgatcgagaccgcgctgcggctggccgacggcatcgtggtgctggacttcgtggatcgc
gacgagcacgcgcacgaccgcgagcggcgtttctccgagcggctggcctgcccgaacggg
caccccctcgatatcgaggatctggaaccgcgttcgttctccttcaactcgccctacggc
gcctgcccggactgcaccggtctcggcattcgcaaggaggtcgatccggatctggtcgtg
ccggacccggagctgagcctggccgacggggccatcgcgccgtggtcgcgcgggcagacc
gccgagtacttcacgcgcctgttgtccggtctggccgaggccatcggtttcagcatggac
accccctggcaggatctgccggccaaggcccggaaggccgtgctggagggcagttccgaa
caggtccacgtttcctataccaaccggtacggccggaagcgttcctactacgccgatttc
gaaggcgtcatgccgttcctgcagcggcgcatggatgccaccgagtccgaggccatgaag
gagcattacgacgggtacatgcgggatatcccgtgccccgtctgcaatggcgcgcgcctg
cggccggagatcttggccgtcaccctggcctcgcgtggcgggcacaagtcgatcgccgag
ctgtcggacctgtccatcggcgaggccgcggacttcctgaactcgctgaccctcgacgag
cggcaggccgccatcgccgcccaggtgatcaaggagatccaggcccgcctgggcttcctg
ctggacgtcggcctgcaatacctgaccctgtcgcgcgcggccgccaccctctccggcggc
gaagcgcagcgcatccggctcgccacccagatcggttccggtctggtcggcgtgctgtac
gtattggacgagccgtccatcggcctgcaccagcgcgacaaccggcggctgatcgaaacc
ctcacgcggctcaagagtctcggcaacaccctcatcgtggtcgaacacgacgaggacacc
atccacgcctcggactgggtggtcgacatcggcccgctcgccggtgagcacggcgggcag
gtggtgtactccggaccgtacgagggcctgctgaaggatcagcgatccctcaccggcgca
tacctttccgggcgcgaacgcatcgaggtcccgatggtgcggcggccgctggacaagaag
aagcagctcaccgtggtcggcgcggtcgagcacaatctgcgcggcatcgacgtgagcttc
ccgctgggcgtgctcaccgcggtcaccggcgtctccggatccggtaagtccacgctggtc
aacgacattctcgcgaccgtgctggcgaacaagctgaacggtgcgcgccaggtccccggc
cggcacacccgggtgaacgggctcgaccatctggacaagctggtccaggtcgaccagtcg
cccatcggccgcaccccgcgctccaacccggccacctacaccggcgtcttcgacaagatc
cgcaccctgttcgcggccaccaccgaggccaaggtgcgcggctaccagcccggccgcttc
tccttcaatgtgaagggcggccgctgcgaagcctgttccggcgacggcactttgaagatc
gagatgaacttcctgccggatgtctacgtcccctgcgaggtctgccacggggcgcggtac
aaccgcgaaaccctggaagtccactacaagggcaagaccatcgccgaagtcctggacatg
cccatcgaggaagcggccgacttcttcgaaccggtgacttccatccaccgctacctcaag
accctggtggacgtcggcctgggctacgtgcgcctgggccagtccgcgccgaccctgtcc
ggcggtgaggcccagcgcgtcaagctggccgccgaactgcagaagcgctccaccggccgc
accgtctacattctcgacgagcccaccaccggcctgcacttcgaggacatccgcaagctg
ctgaccgtcatcaacggcctggtggacaagggcaatacggtcatcgtcatcgagcacaac
ctggacgtcatcaagacctccgactgggtcatcgacatgggtcccgaaggcggctccggc
ggcggcatggtcatcgcccagggcacgccggaagacgttgccgccgtggcggaaagctac
accggccagttcctgaaggaagtcctggcggccggcgaagccaccgcgccgaaggccccg
gcgaagaaggcggtcgccaagaaggccgccgccaagccgacggtggcagcctcggccaac
ggctcgaccgccaagaagtcgaccgcgaaaaaggtcgccgccccgaaggatccggaccag
gcggccgcggcgaagaaggccgcagcggctcgccggaaggctgccgccctgcgctga
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integrated database retrieval system
