Nocardia yamanashiensis: LTV02_36705
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Entry
LTV02_36705 CDS
T07935
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
nya
Nocardia yamanashiensis
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nya03000
]
LTV02_36705
Transcription factors [BR:
nya03000
]
Prokaryotic type
Helix-turn-helix
XRE family
LTV02_36705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
Sigma70_r4
HTH_26
HTH_ParB
HTH_23
HTH_24
DUF8048
HTH_11
HTH_25
Motif
Other DBs
NCBI-ProteinID:
UGT41410
LinkDB
All DBs
Position
7963699..7964724
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AA seq
341 aa
AA seq
DB search
MSRSAQEGEPVGTLVRRLRKERDLTQAQLATRVGCSRSLVQQIENNTRIPPLALRERLSS
VLGERLPTGIAESEDDIETSELRMRFNILLGKDPAVVSRVLAVAQSLVDAAGARGEVEPL
RSIAERQLERAEEVLTQIPSGSATVWEWNTINDWLTVLGRAATAICAIHTADLGTIGGDV
GDEYHQEILRLAGAGVTVRRLYVVDAIEDVVPYEDKLWQQVKAGVETVLINRAFASNAQS
MLIVDESYVATGEYDMGRRERVATRFSALKHDVQFSQRRFNKLYELRSAGMALVVNDVAA
RPELARYQRLGQDDCRALFRAALRQAWGDGNGEPPVEGAAR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctccgcccaagagggcgagccggtcggcacgctggtgcgccgactccgcaag
gaacgcgacctcacccaggctcagctggccacacgggtgggttgctcgcgcagcctggtc
cagcagatcgaaaacaacacgcgcataccgcctctcgcgctgcgcgaacggttgagttcg
gtgctgggcgaacgcctgcccacgggcatcgcggaatccgaggacgatatcgagaccagc
gaactgcgcatgcgtttcaatatcctgctcggcaaggatcccgccgtggtctcccgcgtg
ctggcggtggcgcagagcctggtggacgcggccggcgcgcgcggcgaagtggagccgctg
cggtccatcgccgaacgtcagctggaacgcgcggaagaggtcttgacgcaaatcccgtcc
ggcagcgccaccgtctgggagtggaacaccatcaacgactggctcaccgtgctgggccgc
gccgccaccgccatctgcgccattcacaccgccgacctgggcaccatcggcggtgacgtg
ggcgacgaataccaccaggagatcctgcggctggcgggcgcgggcgtgacggtgcgccgg
ctctacgtggtggacgccatcgaggacgtggtgccctacgaggacaaactctggcagcag
gtcaaggccggggtggaaacggtgctgatcaatcgcgctttcgccagcaatgcccagagc
atgctcatcgtcgacgagagctatgtcgcgaccggggaatacgatatgggccgccgggaa
cgggtggccacccgcttttcggcgctgaagcacgacgtgcaattctcccagcgcagattc
aacaaactctacgaactcaggagtgccggaatggctctcgtggtcaacgacgtcgccgcg
cgaccggaactggcccggtatcagcgactcggccaggacgactgtcgcgccctgttccgc
gccgccctgcgccaggcgtggggcgacggcaatggggagccgccggtcgaaggcgccgcc
cggtga
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