Nocardia yamanashiensis: LTV02_37870
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Entry
LTV02_37870 CDS
T07935
Name
(GenBank) STM4012 family radical SAM protein
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
nya
Nocardia yamanashiensis
Pathway
nya00860
Porphyrin metabolism
nya01100
Metabolic pathways
nya01110
Biosynthesis of secondary metabolites
nya01240
Biosynthesis of cofactors
Module
nya_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
LTV02_37870
Enzymes [BR:
nya01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
LTV02_37870
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
UGT41623
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Position
8203617..8204945
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AA seq
442 aa
AA seq
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MNTLTRPRPYRNYVYGYPHKTAYRPLAPQRPLLRELWAAEPKDALSLYAHIPFCEYRCGF
CNLFTRVGAPGELTTRYLDALERQALAVREALGDGPVRFAAAAFGGGTPTYLTAAELERL
CDIAELRMGANLRGIPLSVETSPTTATADRLTVLAERGATRVSIGVQSFVDAEARSAVRP
QRRAEVEAALERIRAVDIPILNIDLIYGIDGQTERTWRTSLDAALAWRPEELYLYPLYVR
PLTGLGKQGADADAEWDEQRLRLYAAGRDHLLANGYEQRSMRMFRRADAPAEGPEDYACQ
TDGMIGLGCGARSYTAGLHYSFDYAVETREVRGIIDTYTGTTDFSRAEVGFRMDADETRR
RHLLQSLLQADGMELASYRDRFGAHPDAHFLTELREFADLGWLESGPDRLRLTPEGLAYS
DALGPRLFSPAVHAAMTAYEPK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgctcacccgcccccgcccatatcgcaactacgtctacggctacccgcacaag
acggcctaccggccgctcgccccgcagcgcccgctgttgcgcgagctgtgggcggccgaa
cccaaggacgccctgtcgctgtacgcgcacatcccgttctgcgaataccgctgcggcttc
tgcaatctcttcacccgcgtgggcgcgccgggcgaactcaccactcgctacctcgatgcc
ctggaacgccaggcgctggccgtgcgggaagccctgggcgacggcccggtccgcttcgcc
gccgcggcgttcggcggcggcacccccacctatctgacggccgccgaactggagcggctc
tgcgatatcgccgaactgcgcatgggcgcgaacctgcggggcatcccgctgtccgtggag
acctcaccgaccaccgcgaccgcggaccgcctgaccgtactggccgagcgcggcgccacc
cgggtgagcatcggcgtccagagtttcgtcgatgccgaggcccgctcggcggtccgtccg
cagcgccgcgccgaggtcgaggccgcgctggaacgcattcgggccgtggacatcccgatc
ctgaacatcgacctgatctacggcatcgacggccagaccgagcggacctggcgcacctcc
ctggacgcggcgctggcctggcggcccgaggagctgtacctgtatccgctgtacgtccgg
cccctcaccgggctcggaaaacaaggtgcggacgccgacgccgagtgggacgagcaacgg
ctgcgcctgtacgcggcgggccgggatcacctgctggccaacggttacgagcaacgctcc
atgcgcatgttccgtcgcgccgacgctcctgccgagggacctgaagactatgcctgccag
accgacggcatgatcggtctcggctgcggggcgcggtcttacacggcgggactgcactac
tcgttcgactacgcggtggaaacccgcgaggtgcgcggaatcatcgatacctacaccggc
acaacggatttcagccgagccgaagtcggattccggatggacgccgacgagacccgccgc
cgccacctcctgcaatccctgctgcaagccgacggcatggaactcgcctcctaccgggac
cgcttcggcgcacaccccgacgcccatttcctcacggagctacgggaattcgccgacctg
ggctggctggagtccggaccggatcgcctgcgtctcacccccgagggcctggcctactcc
gacgcgctcggcccgcgcctgttctccccggccgtgcacgccgccatgaccgcctacgaa
ccgaagtga
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