Nocardia yamanashiensis: LTV02_38855
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Entry
LTV02_38855 CDS
T07935
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nya
Nocardia yamanashiensis
Pathway
nya03030
DNA replication
nya03430
Mismatch repair
nya03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nya00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LTV02_38855 (holA)
03430 Mismatch repair
LTV02_38855 (holA)
03440 Homologous recombination
LTV02_38855 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nya03032
]
LTV02_38855 (holA)
03400 DNA repair and recombination proteins [BR:
nya03400
]
LTV02_38855 (holA)
Enzymes [BR:
nya01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LTV02_38855 (holA)
DNA replication proteins [BR:
nya03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LTV02_38855 (holA)
DNA repair and recombination proteins [BR:
nya03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LTV02_38855 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
UGT41797
LinkDB
All DBs
Position
8408352..8409323
Genome browser
AA seq
323 aa
AA seq
DB search
MNQRPAPLHLVLGEEELLIERAVAAVTAQARAASEAPEALPVDRLRAGDASTSELAELLS
PSLFAEDRVIVLESAAEAGKDAVSVIQDAAAAPPDGVVLIVLHTGGGRAKALAPALQKLG
AVVHNCAKLSKGGERVEFVRNEFRAANVKVSADVVQALIEAVGSDLRELAAASSQLAADT
GGKVDVAAVRQYYSGKAEVTGFEVADLAVAGDRAAAMEALRWAIDRGVPAVLLADALADS
VHTIARVGSAGRGDPFKMAGDLGMPPWKVKKAQQQVRGWTGATIGQALQIVAALNGEVKG
QAADTNYALEHALSRILDLREAA
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccagcgacctgcgcccctgcatcttgtgctcggtgaagaggaattgctgatcgag
cgggcggtggcggcggtgacggcgcaagctcgggctgccagtgaggcgccggaggctttg
ccggtggatcggttgcgggcgggggatgcgagtacttcggagttggcagagttgctgagt
ccttcgctgttcgcggaggaccgggtgatcgtgctggagtccgccgcggaggcggggaag
gacgcggtgtccgttattcaggatgccgccgcggcgccgccggacggggtggtgctgatc
gtgctgcacaccgggggcggtcgggcgaaggcgctggcgccggccttgcagaagctgggg
gcggtggtgcacaactgcgccaagctcagcaagggcggggagcgggtggagttcgtgcgc
aacgagttccgggccgcgaacgtgaaggtgtccgccgacgtggtgcaggcgctgatcgaa
gcggtgggatcggatctgcgggaattggccgcggccagttcgcagttggcggccgatacc
ggcggcaaggtcgacgtagcggcggtacggcagtactactccggcaaggccgaggtcacc
ggtttcgaggtggcggatctggcggtggcgggggatcgcgccgccgcgatggaggcgctg
cgctgggccatcgatcgcggggtgcccgcggtactgctcgccgacgcgctggccgactcg
gtgcacaccatcgcccgggtcggatcggcgggacgcggcgaccccttcaagatggcgggc
gacctgggcatgccgccgtggaaggtgaagaaggcgcagcagcaggtgcgcggctggacc
ggcgccaccatcgggcaggccctgcagatcgtggcggcgctcaacggcgaggtgaaaggc
caggcggccgacaccaattacgcactggagcatgccctttcccgcattctggacctgcgc
gaagccgcctga
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