Niabella yanshanensis: U0035_01820
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Entry
U0035_01820 CDS
T09723
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nyn
Niabella yanshanensis
Pathway
nyn03030
DNA replication
nyn03430
Mismatch repair
nyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U0035_01820
03430 Mismatch repair
U0035_01820
03440 Homologous recombination
U0035_01820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nyn03032
]
U0035_01820
03400 DNA repair and recombination proteins [BR:
nyn03400
]
U0035_01820
Enzymes [BR:
nyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U0035_01820
DNA replication proteins [BR:
nyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U0035_01820
DNA repair and recombination proteins [BR:
nyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U0035_01820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
DNA_pol_A_exo1
GH43_C2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
WQD38881
UniProt:
A0ABZ0W6X4
LinkDB
All DBs
Position
525505..526896
Genome browser
AA seq
463 aa
AA seq
DB search
MEYAIVDIETTGGNAGLGSITEIAIRIFNGNQVIDSYETLVKPLHSIPPYVASLTGINDD
MVANCLPFADIAKDVFTMLEGRTFVAHNVNFDYSFLKHHLGSAGYHYAAPKLCTIRMSRK
IRPGLPSYSLGNLCDALDISIAGRHRAGGDADATALLFSKLLAWDLDGVIPAMLNEVAEE
KQLPAALRNDFDGLPNTPGVYYFYNDSDEVIYIGKARDLKKRVGQHFAIHSPNRKGSKFA
KKVARISYEACGTELMALILEVLEIKRVYPKYNTALKKYEAKAGLFVYEDENGYQRMTIA
KAKKGYQPVQVFTTRQGGMNKLRELSRRYGLCASLCRLSSCELCDLVDKQKDLLCTANQA
PDVYNQKVERALSFLKKDEQGFYIMDKGRHAGEKSCIWVENGQFYGMGYIDNDADIYSLN
DVRDSLTRYPGDHYIMQLIISYVCKYPRKVAPITGKPVSAEWD
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgccattgtagatattgaaactacgggaggtaacgcaggtttgggcagtata
accgaaattgcaatacgcatttttaatggcaaccaggttatcgacagttatgaaacactg
gtaaaaccgcttcattccattccgccttatgtagcatcgcttacaggcatcaatgatgac
atggtagccaattgcctcccttttgccgacatcgccaaagatgtttttactatgctggaa
ggcagaacctttgtggcgcataatgtcaattttgattattcttttctgaaacatcacctg
ggtagcgcaggttaccactatgcggctcccaaattgtgcacgatccggatgagccggaag
atcaggccgggcctgccttcttacagcctcggaaatttgtgcgacgcgctggatatcagc
atagcaggcagacacagagcaggtggcgatgcagatgccacagccctgctgttttcaaaa
ctgctggcatgggacctcgacggggttattccggccatgttaaatgaagtggcagaagaa
aagcaattacccgcagcgctgcgaaacgattttgacgggttacctaacacgcccggcgtt
tactatttctataatgacagtgacgaagtcatttatatcggtaaagcccgggatctgaaa
aagcgggtaggacagcattttgccatacacagtcccaaccgcaagggctctaaattcgca
aaaaaggtagcgcgcatcagttatgaagcctgcggaactgaactgatggctttaatactc
gaagtgctggagattaaacgggtttatccaaaatataataccgccctgaaaaagtatgaa
gcaaaggcgggtctttttgtttatgaagatgagaatggctaccaaaggatgaccatcgcc
aaagcaaaaaagggataccagcccgtgcaggtatttacaaccaggcagggaggcatgaac
aaattgcgtgagctatccaggcgttatggtttatgtgcttcgctatgccgcctaagcagc
tgcgagctttgcgacctggtagataagcaaaaggatctgctgtgcaccgccaaccaggct
ccggatgtctataatcaaaaagtagagcgggcactctcttttctgaaaaaagacgagcag
ggattttatattatggacaagggaagacatgcgggggaaaagagctgtatctgggtggag
aacgggcagttttacggtatggggtacatcgataatgatgcagacatttattctctaaac
gatgtaagggatagtcttacccgttaccccggcgatcattatattatgcagctgatcatt
tcctatgtatgtaaatatccccgtaaagtggcgcccataacaggtaagccggtctccgct
gaatgggattga
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