Niabella yanshanensis: U0035_04955
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Entry
U0035_04955 CDS
T09723
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nyn
Niabella yanshanensis
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nyn03009
]
U0035_04955 (rimO)
Enzymes [BR:
nyn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
U0035_04955 (rimO)
Ribosome biogenesis [BR:
nyn03009
]
Prokaryotic type
ribosomal protein modification factors
U0035_04955 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
WQD39495
LinkDB
All DBs
Position
complement(1290307..1291617)
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AA seq
436 aa
AA seq
DB search
MKVRTLKKDKVNIITLGCSKNMVDSEVLSGQLLANDIDVVHENKKRDHNIVVVNTCGFID
KAKEESINTILEQVELKKRGRLDKVYVTGCLSERYKNNLEEEIPEVDAFFGTMELPSILK
QFEADYKTELVGERLLATPKHYAYLKISEGCNRTCTFCAIPLMRGKHISKPIDELVMEAE
KLVRMGVKEVMLIAQELTYYGLDIYKKRMLSELLHRLADVKGLEWIRLHYAYPTKFPLEI
LDVMRERDNICKYLDIPLQHASDRMLDAMKRQIKQAEMDELIATIRERVPGICLRTTLIA
GFPGETQDDINELKSFLDKHRFDRVGVFTYSHEENTGAYQLEDDVPQEEKERRAQEVMEH
QQEISYKLNQEKIGKVFKTIIDKKEAGRYIGRTEFDSVEVDNEVIITSDQRLKIGAFYNV
RIEKAYDYDLEGVVVP
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtaagaacgctaaaaaaagataaggttaacatcattacattaggctgtagcaaa
aacatggtggatagcgaagtgttgagcggtcagctactggctaatgatattgatgtggtg
catgaaaacaagaaacgggatcataatatagtggttgtcaatacctgcggtttcattgat
aaagcaaaggaagagagtattaacacgattctggagcaggtggagttgaagaaacgcggc
cgcctggataaggtatacgtaaccggctgcctgagtgagcgttacaagaataacctggag
gaggaaatacctgaagtggatgcttttttcggtacgatggaattaccttctatcttaaag
caatttgaagctgattataaaacggagctagtgggagagcgcctgttagctactcccaaa
cattatgcttacctgaaaatttctgaaggctgcaaccgcacctgcacattttgcgccatt
cccctgatgcgtggcaaacatatcagcaagccgattgacgagttggtgatggaggctgaa
aagctggtgcgtatgggtgtgaaagaagtaatgctaattgcgcaggagctgacttattat
ggcctcgatatttataaaaagcggatgctgtcagaattattacatcgcctggcagatgtg
aaaggattagagtggatcaggctgcactatgcgtatccaaccaaatttcccttagagata
ctggatgtgatgagggagcgcgataatatttgtaaatacctggatatcccgttacaacat
gcatctgaccgtatgctggatgcaatgaaaagacagatcaaacaggcggagatggacgaa
ttgatcgctaccataagagagagagttccgggtatttgtttgcgcactactttgatagcc
ggcttcccgggtgaaacacaggatgatattaatgaattaaaatcattccttgataaacac
cgttttgacagggtaggggtatttacttattcacatgaggaaaatacaggtgcataccag
ttagaagatgatgtaccgcaggaagaaaaagagcgccgggcacaggaagtaatggagcat
cagcaggagatatcctacaaattgaaccaggaaaaaataggtaaagttttcaaaactatt
attgataaaaaagaagcaggtcgttatattggccgcaccgaatttgatagtgtggaagta
gataatgaagtgatcatcaccagtgatcagagactgaagatcggtgcgttttataacgta
aggatcgaaaaggcctatgattatgacctggagggagtggtggtgccttaa
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