Niabella yanshanensis: U0035_05335
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Entry
U0035_05335 CDS
T09723
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
nyn
Niabella yanshanensis
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nyn03016
]
U0035_05335 (miaB)
Enzymes [BR:
nyn01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
U0035_05335 (miaB)
Transfer RNA biogenesis [BR:
nyn03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
U0035_05335 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WQD39568
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Position
1365578..1367002
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AA seq
474 aa
AA seq
DB search
MLDLVANKTHDEQRQGESYAPFSVDPNEYQKKFYIESYGCAMNFADSEVVASILNKEGFG
ATRNVEEANLIFINTCSIREKAEQTVRKRLTEFRKLKARNPGTLVGVLGCMAERLKSKFL
EEEKLVDIVVGPDAYRSLPRLVDEAADGHRSIDVLLSREETYADIAPVRLNTNGVSAFVS
IMRGCNNMCSFCVVPFTRGRERSRDAESIINECKDLFENGYREVTLLGQNVDSYYYNAES
NSTEHAVTFAQLLEKVALISPLLRVRFSTSHPKDITSDVLRTMAAHENICKCIHLPVQSG
STRVLQLMNRTYTREWYMMKVDEIRAILPDCSLTSDMIAGFCTETEEEHQETLSIMDYTR
YDYSYMFFYSERPGTLAQRRYKDDIPVEVKKRRLQEIIEKQNELSRINFAQDLGKTFKVL
IDGDSKRSADDWVGRTSQNKVVIFPKNNMDLQKGDYVEVKVNNCTQATLFGEII
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatttggtagcgaataaaacgcatgatgaacaacggcagggagaaagttatgct
cctttttcggtggaccctaatgagtatcaaaagaaattctatatcgaaagctatggctgc
gcaatgaactttgccgacagtgaagtagtggcatctattttaaacaaagaaggttttggc
gctacgcgaaatgtggaagaagccaaccttatttttattaatacctgctctatacgcgaa
aaagcagagcaaacagttcgcaagcgcctgacagaattcaggaagctgaaggcccgtaac
cccggcacgctggtgggcgtattgggttgcatggcagagcgtttaaaatccaagttttta
gaagaagaaaaactggtagatattgtagtaggccctgatgcttaccgcagcctgcccagg
ctggtagatgaagcggcagacgggcacagaagcattgacgtattgctcagtcgcgaagaa
acttatgccgacattgcacctgttcgtttaaacaccaatggggtatctgcttttgtgagc
attatgcgcggttgtaacaatatgtgctctttttgtgttgtgccctttacaagaggccgt
gaacgcagtcgcgatgcggaaagcattattaatgagtgtaaggacctgtttgagaatggc
taccgcgaggtaaccctgctgggacaaaatgttgatagctattattacaatgcagaaagt
aatagcaccgaacatgccgtaacttttgcacaattattggaaaaagtggcactgatctct
cctttgctcagggttcgtttttctacctcccaccctaaagatattaccagtgatgtgctg
cgtaccatggccgctcacgaaaacatctgtaaatgtatccaccttccggtgcaaagtggt
tctacacgcgttttacagctcatgaaccgtacttatacacgtgaatggtatatgatgaag
gtggatgagatcagggctattttgcctgactgcagtcttacttcggacatgattgcaggc
ttctgtacggaaacagaggaagagcaccaggaaaccctttctatcatggattataccaga
tacgactatagctatatgttcttttacagcgaacgcccgggcacattggcacaacgccgt
tataaagacgatattccggtggaagtgaagaagcgcaggctgcaggagatcatcgaaaaa
caaaatgaattatcacgcattaattttgcgcaggaccttggtaaaacgtttaaagtgctg
attgatggagacagcaagcgcagcgctgatgattgggtaggacgtacctcgcaaaataag
gttgtgatcttccctaaaaacaatatggacttgcaaaaaggtgattatgtggaagtaaaa
gtgaacaattgcacacaagctaccctgtttggagagattatatag
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