Niabella yanshanensis: U0035_09825
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Entry
U0035_09825 CDS
T09723
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nyn
Niabella yanshanensis
Pathway
nyn03030
DNA replication
nyn03430
Mismatch repair
nyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U0035_09825
03430 Mismatch repair
U0035_09825
03440 Homologous recombination
U0035_09825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nyn03032
]
U0035_09825
03400 DNA repair and recombination proteins [BR:
nyn03400
]
U0035_09825
Enzymes [BR:
nyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U0035_09825
DNA replication proteins [BR:
nyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U0035_09825
DNA repair and recombination proteins [BR:
nyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U0035_09825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
DUF7508
Motif
Other DBs
NCBI-ProteinID:
WQD40444
LinkDB
All DBs
Position
complement(2424274..2425647)
Genome browser
AA seq
457 aa
AA seq
DB search
MYAIVDIETTGGYADANGITEICIVIFDGIEVVERYETLINPVHRIPPYIEALTGISNAM
VAGAPVFEEVAERIYELLNGKVFVAHSVNFDYSFVRNQLQVCGYAYDANKLCTVRMSRKI
LPGYQSYSLGKLCNALGITHVNHHRAGGDTDATVALFRMLLEHDTEGHIIKSLKRTSKEH
VLPPNVPKTDFENLPYTAGVYYFHDEKGKVVYVGKAKNIRYRVSSHFSNNATSRQKQNFM
REVYRISFEECGTELMAAVKESSEIKRLWPRFNAAQKKREDMYGIIRYYDQNGYIRLAID
KVNSRYEVISSYHHLENAGAALRQLVQDFNLCPHLCFISKNLYDEAKHAVLCKGACEKRE
TVVDYNCRVESAIDKLKGLPSFVIIDEGITRDQNSCILVWQGKFYGMGFIPNDTVVEEPE
RLKDLVTPYKENSIITNMLFSYAKRYPAKVKTFNSVI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcaattgttgatatagaaaccacgggtggttatgccgatgccaatggtatcaca
gaaatctgcattgtcatttttgatggaattgaggtagtggaacgatatgaaactctgatt
aacccggttcatcgtatacctccttatatcgaagcattgacaggtatcagcaatgctatg
gtagccggagcacctgtttttgaagaggtagccgaacgtatttatgaactgctgaacgga
aaagtatttgtggcgcacagcgtaaacttcgattattcttttgtacgtaaccagctacag
gtttgcggatatgcttatgatgcgaacaagctgtgtacggttagaatgagccgtaaaata
ctaccaggctaccagtcgtacagcctcggtaaactgtgcaatgctttgggtataactcat
gtaaatcatcatagagccggcggtgacacagacgctactgtagcattgttcaggatgctg
ttggagcatgacaccgaggggcatatcattaaaagcttaaagcgtacatctaaggaacat
gtattaccgcccaatgtgcccaaaactgattttgaaaacctgccttatactgcaggggtc
tattattttcatgatgaaaaaggaaaggtggtttacgtaggaaaggcgaaaaatatacgt
tacagggtaagcagtcattttagcaataacgctacctcccggcaaaagcaaaactttatg
agggaagtataccgcatcagtttcgaggagtgtggtacggagctaatggctgctgttaaa
gaatcatctgaaataaaacgattgtggccccgttttaatgcggctcaaaaaaagcgggaa
gatatgtatggcatcattcgctattatgatcagaatggatatataaggctggctatagat
aaggtgaatagccgttacgaggtcatcagctcttatcatcatctagaaaacgcaggtgca
gccttgagacagcttgttcaggatttcaatctctgcccgcatctctgcttcatcagcaaa
aatctttacgatgaagccaagcatgccgtcttgtgcaaaggagcttgtgaaaagcgagaa
acagtggtcgattataattgccgggttgagtcggccatcgataaattaaaaggtctgccg
tcttttgttatcattgatgaaggtattacccgcgaccaaaactcctgtatattggtatgg
cagggcaagttttatggcatgggatttatacctaacgataccgttgtggaagagccggaa
aggttgaaagacctggttacaccctataaagaaaatagcatcattaccaacatgcttttc
agctatgccaaaagatatccggctaaagtaaaaacatttaatagtgttatttga
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