Niabella yanshanensis: U0035_10550
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Entry
U0035_10550 CDS
T09723
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
nyn
Niabella yanshanensis
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nyn03019
]
U0035_10550
03009 Ribosome biogenesis [BR:
nyn03009
]
U0035_10550
Messenger RNA biogenesis [BR:
nyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
U0035_10550
Ribosome biogenesis [BR:
nyn03009
]
Prokaryotic type
rRNA processing factors
U0035_10550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
DnaJ_CXXCXGXG
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
WQD40587
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Position
complement(2584455..2586002)
Genome browser
AA seq
515 aa
AA seq
DB search
MNKEIVINAAPTGVEIALLEDKKLVELHSEKSDGRFAVGDLYLGKVKRLMPGLNAAFIDV
GFEKDAFLHYTDLSPYAKSLLKFTNMAMAATDANPVDFSKFSVEPEIVKTGKISEVLGGK
PHVLVQILKEPIAAKGPRLSCELSLPGRFVVITPFNNIVAVSKKIHSSEERKRLQKIIEA
VKPKNFGVIVRTAAEGKNTAELYEDLGNLVNIWNTVQQNLRGAVAPTKIFSEQNKTNSIL
RDLLSADYNRIVTNDKNIYNETKNYIQKIAPEKAEIVNQAQGNVFDILGITKQVKGSFGK
TVTLNSGAYLIIEHTEALHVVDVNSGYKNVGNNQEQNALETNLEAAAEIARQLRLRDIGG
IIVVDFIDMKLAENKKKLFDTMEEVMQADRAKHSVLPISKFGLMQITRQRMRPEVNINTQ
EVCPSCNGSGKITSTLVLEDEIEKNLNYLITHKHKNLKLIVHPIVYGYLTKGLWWSSKLS
KWNKKFGQKTRIEKDTAYQLTEYHFFDSNEEEIKF
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagaaattgtaattaatgccgctccaactggtgttgaaattgctttgttagaa
gataagaagctggtggagttgcatagcgaaaaaagcgatggccgctttgccgtgggtgat
ttatacctgggtaaagtgaagaggctgatgcccgggcttaatgccgcttttatagatgta
ggctttgaaaaagacgcatttttgcattataccgacctaagcccttatgcaaaatcgtta
ttaaagtttactaatatggctatggcagccacagatgccaaccctgtagacttttcaaaa
ttcagcgttgaaccggaaattgtaaaaaccggtaagatcagcgaggtgctgggtggtaaa
ccccatgtgctggttcagatattgaaagagcccattgcggccaaaggcccccggcttagc
tgtgaactttctttaccgggcagatttgttgtaatcacgcccttcaataatattgtagca
gtatctaagaaaattcactcttcggaagaaaggaaaagactgcagaagataattgaagcc
gttaagccaaagaactttggtgtaattgtaagaactgcagcggagggaaaaaatacagca
gaactctatgaagacctcgggaacctggtcaatatctggaacacggttcagcaaaatctg
aggggagcagtagcgcctaccaagattttcagcgagcagaataagactaacagtatctta
agagatcttttaagcgcagattataaccgtattgttaccaacgacaagaatatctacaac
gaaaccaaaaactatatccagaaaattgcgcccgagaaagcggagatcgtgaaccaggcg
cagggtaatgtttttgatattttaggtattaccaagcaggtaaaaggatcttttgggaaa
acggttactttaaacagtggcgcttatctcattatagagcatactgaagccctacacgtt
gttgatgtaaacagcggctataaaaacgtggggaataaccaggaacaaaatgcactggaa
accaacctggaggctgctgctgaaattgcccggcaattaaggttgagagatatcggagga
atcatcgtagtggatttcatcgatatgaaacttgccgaaaataagaagaagctttttgat
acaatggaggaagtaatgcaggccgacagggcaaagcattcggtattacccatctccaag
tttggattgatgcagattacccggcagcgcatgcgtcccgaagtaaacatcaacacccag
gaggtatgtcccagctgtaatggtagcggcaaaataacctcaacactggtattggaggac
gagatcgaaaagaacctcaactatcttatcacacacaagcataaaaatctcaaactcatc
gtacatcctattgtatatggatatttaacaaagggtttatggtggagcagtaagttgtct
aagtggaataaaaaatttgggcagaaaaccagaatagaaaaagatacagcttaccagctg
accgaataccacttcttcgattcgaacgaagaagaaattaagttttaa
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