Niabella yanshanensis: U0035_11600
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Entry
U0035_11600 CDS
T09723
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
nyn
Niabella yanshanensis
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nyn03016
]
U0035_11600 (mnmE)
Transfer RNA biogenesis [BR:
nyn03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
U0035_11600 (mnmE)
Prokaryotic type
Methyltransferases
U0035_11600 (mnmE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
GTP_EFTU
RsgA_GTPase
ABC_tran
AAA_15
cobW
DO-GTPase2
ABC_ATPase
AAA_29
Arf
MS_TIM-barrel
MMR_HSR1_Xtn
Roc
NuiA
Ras
AIG1
AAA_22
AAA_18
AAA_24
AAA_28
DUF2523
Motif
Other DBs
NCBI-ProteinID:
WQD36308
LinkDB
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Position
complement(2796764..2798116)
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AA seq
450 aa
AA seq
DB search
MNMLSGLGDTIVALATAPGVSAIGVIRLSGADAIHIADKIFRGKNLLKQASHTIHFGHII
SGDEVIDEVVVSLYLDKRSYTGENTVEISGHGSPYILGKIIEAAVAAGARLARPGEYTQR
AFLNGKLDLAQAEAVADLIAANSKAAQQTALNQLRGGFSSDLKLLRDELINFAALIELEL
DFSDEDVEFADRTKFQALISNLKSQVSGLLESFKLGNAIKNGISVAIIGKPNAGKSTLLN
ALLNEERAIVSDIAGTTRDTIEESLNIGGILFRLIDTAGIREHSTDTIENLGIERSKQNA
EKADIIIHLLDATDKEENDFDWLKQFEDKTITVLNKADVAPVSGIKYQISISAKNKNNIE
ALQSAMYEKAIGEAINTESTIVTNARHHEALQKIIESIDAIEAGMQNNLSGDLLTIDIRR
ALHYLGEITGQVEVDRDILGTIFGKFCIGK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgctttcgggtttgggtgataccattgtggcgctggcaacagctcccggtgta
agtgcaataggcgttatcaggctgagtggcgctgatgccattcatattgcggataaaatt
ttcaggggtaaaaacctgctaaaacaggcttctcataccattcattttggtcacattatt
tccggcgatgaggtcattgatgaagtggtagtttctttatacctggataagagaagttat
acaggagaaaatacggttgagatcagcggacatggatcgccttatatactgggcaagatc
attgaagctgctgtagctgcaggcgcccgactggcaagaccgggggagtatacccaacgc
gcttttttaaatggcaagctggacctggcacaggccgaagcggttgctgaccttattgcg
gccaatagcaaagcagcccagcaaaccgcattgaaccagttaaggggcggcttttcgagc
gacttaaaactattgcgcgatgagctgatcaactttgcggcattgatagagctggagctc
gattttagtgatgaggatgtagaatttgcagaccggactaagttccaggctttgatctcg
aatcttaaatcgcaggtctctggtctgttagaatcttttaaactcggcaatgctattaaa
aacggtatcagcgtagctattattggcaaaccaaatgccggtaaatccactttattaaat
gccttgctgaacgaagagcgcgccattgtaagtgatattgcaggcactacccgggatact
attgaggaaagcctgaacataggcgggatattatttcgtctcatagatacggccggtatc
cgcgaacatagtacagatactatagaaaacctgggtattgaacgcagcaagcaaaatgcg
gagaaggccgatattattattcacctgctcgatgctacagataaagaggaaaacgatttt
gattggctaaagcaatttgaagataaaaccataactgttttgaacaaggcagatgttgca
ccagtatccggcatcaagtatcaaatatccatatccgcaaaaaacaaaaacaatatagag
gccctgcaatcggccatgtacgaaaaagccattggtgaagcaatcaataccgaaagcact
attgttaccaatgcccgccaccacgaagcgctgcagaaaattattgaaagcattgatgct
attgaagccggtatgcaaaataacctcagcggagacctgctcaccatcgatatccgacgg
gccctgcattacctgggcgagatcaccggccaggtagaggttgaccgggatatactgggg
acgatctttggcaagttttgcattggcaaatag
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