Niabella yanshanensis: U0035_11780
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Entry
U0035_11780 CDS
T09723
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
nyn
Niabella yanshanensis
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nyn03400
]
U0035_11780
DNA repair and recombination proteins [BR:
nyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
U0035_11780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
TrwB_AAD_bind
FtsK_SpoIIIE
ResIII
AAA_16
Zot
AAA_30
AAA_6
T2SSE
AAA_7
DUF5852
OVT1
Motif
Other DBs
NCBI-ProteinID:
WQD36344
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Position
complement(2833721..2835310)
Genome browser
AA seq
529 aa
AA seq
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MSGIFTFEQNYFQNTAMSNTSAFLEAVNNGYAFKGEKFKIGRAMLDGQVVEGADVFIPFK
TLNRHGLIAGATGTGKTKTLQVLAEGLSDASIPVVLMDIKGDLSGIGAAGTSNEKIESRC
QQLGVEFRPAAYPLEFLTLSNEKGTRLRATVSEFGPILLSKILDLNDTQSGLVAMIFKYC
DDNKLPLLDLKDFIKVLQFVSDEGKTELEKDYGKVSTTSTGTILRKVIELQQQGADLFFG
ERSFDVEDLMRVSNDGRGMISIVRVTDLQDRPKLFSTFMLQLLAELYASSPEEGDMDQPK
LVLFIDEAHLIFNEASEALLRQIETIVKLIRSKGIGIYFCTQNPMDVPASVLSQLGLKVQ
HALRAFTAADRKVIKQTAENYPETAFYKTDELLTQVGIGEALITMLNEKGVPTPLVHCML
RAPQSRMDVLTDAELNAIADSSKIARHYNEVIDSNSAYEILTQKLEAAASQKEEIAQQKE
EAKAQKDEKGFFDNPIVKSVARTAGNTIVRSLLGAIGLSGGSRKRKSWF
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagtggaatatttacttttgaacaaaactattttcaaaacacagctatgtctaataca
tccgcgtttcttgaagcagtaaataatggctatgcctttaaaggagaaaaatttaaaata
ggccgcgctatgctggacggccaggtagtggaaggtgccgatgtattcatcccttttaag
accttaaaccggcatggtttaattgcgggggctacaggaaccggtaaaaccaaaaccctg
caggtactggctgagggattaagtgatgcgagcatacctgtggtgttaatggatattaaa
ggtgacctgagcggtattggagctgcgggcaccagcaatgagaaaatagaaagccgctgc
cagcaattgggtgtggaatttagacccgcggcttaccctttagagtttctcaccttgagc
aatgaaaagggtacccggctgcgcgccacagtaagtgagtttggccccatactgctttcg
aaaattctcgatctgaatgatacgcaaagcgggttagtggctatgatctttaaatattgc
gatgataataagctgcctttgctcgacctgaaagactttattaaagtgctgcagtttgta
agtgatgagggtaagactgaactggaaaaagactatggtaaagtatccaccacatctacc
ggaacgatattaagaaaggtaattgaactgcagcaacagggggcagatcttttttttggc
gaaagaagttttgatgttgaagacctgatgcgcgtgagtaacgatggacggggcatgatc
tctatagtacgggtaacagatttacaggatcgtcccaagttattttctacgtttatgcta
caactattggcagaattatatgcgtccagtccggaagaaggagatatggatcagcccaag
ctggtactgtttatcgatgaagcccatttgattttcaatgaagccagcgaggctttgtta
aggcagattgaaaccatagtaaagcttattcgttcaaagggtattggtatttatttctgc
acccaaaaccctatggatgtgcccgcttcggtattgtcacagctgggattgaaagtgcaa
catgctttacgtgcttttacagcggcagacaggaaggtaattaagcaaacagcggagaac
tatcccgagaccgcattttacaaaacagatgaattactcacacaagtgggtattggtgag
gctttgatcaccatgctcaatgaaaaaggggtgcccacgccgttggtgcactgtatgctg
cgggcgccgcaaagtcgcatggatgtattaacagatgctgaattaaatgccattgcagat
agctctaaaatagcccggcattataatgaagtgattgactccaatagtgcgtacgagata
ttaacccaaaagctggaagctgcggccagccagaaagaagaaattgcgcagcagaaagaa
gaagccaaagcgcaaaaggatgagaagggtttcttcgataatcctattgtaaaaagcgta
gcacgtactgccggtaatactattgtgcgatccctgctgggggctatcgggctcagcggc
ggaagcaggaaaagaaaaagctggttttaa
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