Niabella yanshanensis: U0035_12380
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Entry
U0035_12380 CDS
T09723
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nyn
Niabella yanshanensis
Pathway
nyn03030
DNA replication
nyn03410
Base excision repair
nyn03420
Nucleotide excision repair
nyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U0035_12380 (polA)
03410 Base excision repair
U0035_12380 (polA)
03420 Nucleotide excision repair
U0035_12380 (polA)
03440 Homologous recombination
U0035_12380 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nyn03032
]
U0035_12380 (polA)
03400 DNA repair and recombination proteins [BR:
nyn03400
]
U0035_12380 (polA)
Enzymes [BR:
nyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U0035_12380 (polA)
DNA replication proteins [BR:
nyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
U0035_12380 (polA)
DNA repair and recombination proteins [BR:
nyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
U0035_12380 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U0035_12380 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Mt_ATP_synt
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WQD36463
LinkDB
All DBs
Position
complement(2985058..2987913)
Genome browser
AA seq
951 aa
AA seq
DB search
MEKKLFLLDAYALVFRAYYALIRSPRITSKNKNTNAQFGFTNTLVDLLNKQKPTHMAVCF
DTHEPTERHTDYAEYKANRQETPEDILIAVPDIKRIIKGFNIPCVETDGYEADDVIGTLA
KKAAAEGYEVYMVTPDKDYGQLVSEKIKIYKPGYQGGDVEIMGPEEVCDKWNIKNVSQVI
DVLGLMGDAVDNIPGIAGVGEKTAAKLLAEYETLENVVANAENIKGALGKKVVEGRDLAI
LSKKLATIITDVPVEFHEEDFKVKDWNKEALKEIFGELEFRTLAKRLLGEDVEAVAGAAS
PADKKAAAGKTLQIDLFGNVIGGEEEAQPTPVIEAEDDAPSFSTLKKLSDVPHEYSAITG
ADAVNNLVQQLSSFDEICFDTETTNIDANLAELVGMSFSVKPGEAYWVPCPAERAETDTI
LAAFRRLFDDPSKTWIGQNLKYDLLVMKWYGVEFRGKLFDTMLAHYVIEPDGKRSMDQLS
AKYLGYEPIPIDELIGKKGKSQGTMRDVALEKITDYAAEDADITLQLKEAFTPLLAKKEV
QRVFDEVENPLLRVLTDMEFEGVRIDEGFLKAYSQELEKDAIEAEKKVFEIAGVRFNLAS
PKQLGEVLFDKLKLDASARKTKTGQYQTGEDVLLKLAAKGHAIADAIITFRELTKLKSTY
VDALPQLINPRTGRVHTTYGQAVAVTGRLASNNPNLQNIPVRTDRGKEIRKAFVPRDANH
ILLSADYSQIELRIVAGISGDENMVNAFKSGVDIHTATAAQVFNVAVEDVTKEMRYKAKS
VNFGIIYGQGAFGLADNLGISRTEAKAIIDSYKKEFSGIQRYMDDTINFAREHGYVQTLM
GRKRWLKDINSGNFTVRGFAERNAINSPIQGTAADMIKLAMQKVHAAMKKAGMKSKMILQ
VHDELIFDTLREEVNELKPLILENMEAALPLPFGVPVIAECGQGENWLEAH
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaagttgtttctgttagatgcttatgccctggtttttcgtgcgtactatgca
ttaattcgtagtccgcgtattaccagtaaaaacaaaaataccaatgcccagttcggattt
accaataccctggtggatttactgaacaaacaaaagccaacccatatggccgtttgcttc
gatacgcatgaacctactgagcgccataccgattatgctgagtataaggctaatcgccag
gagacgcctgaagatatattaattgctgtgcctgatatcaagcgcatcatcaagggcttt
aatattccctgtgtagaaactgatggttatgaagcggatgatgtgatcggcacactcgct
aaaaaagctgccgcagaagggtatgaagtatatatggttacgccggataaagattatggc
caattggtatccgagaaaataaagatctacaaaccgggttaccagggtggcgatgtagaa
ataatgggacccgaagaagtatgtgacaagtggaatattaaaaatgtttcacaggtaatt
gatgtgctcgggctcatgggtgatgcagtggacaatatcccgggcattgccggagtgggc
gaaaaaacggcggccaaattattagcggagtatgagaccctggaaaacgtggtagctaat
gctgaaaatattaaaggtgcattaggaaaaaaggtcgtggaaggcagagacctggccatt
ctttccaaaaagctggcaaccatcatcactgatgtgccggtggaatttcatgaagaagat
tttaaggtaaaagactggaacaaagaagcattaaaagagatattcggcgaactggaattc
agaacccttgctaaaaggttgctgggcgaggacgtggaagcagttgcaggcgccgcgtct
ccggctgataagaaggctgctgctggtaaaaccttgcagattgatctttttggtaatgta
ataggaggtgaagaagaagcgcaacccactcccgtgattgaagcggaagatgatgctcct
tctttttcaaccttgaaaaagttaagcgatgtaccccacgagtactctgccattacaggt
gcagatgctgttaacaacctggtgcagcagctgtcttcatttgatgaaatttgttttgat
acagaaaccactaatatcgacgccaacctggcagagctggtaggcatgagcttttcggta
aaaccgggtgaagcttattgggttccctgtccggccgagcgtgcagaaacagataccata
ctggcggcttttcgccggctgtttgatgatccctctaaaacatggatcgggcaaaacctc
aagtatgatttattggtgatgaaatggtatggcgttgaatttagaggcaagctgtttgac
acaatgctggcgcactatgtgatagagcctgatggtaaacgcagcatggaccagctaagc
gccaaatacctgggttatgagcctatccctatcgacgagctgattggtaagaagggaaaa
agccagggaaccatgcgtgatgtggcgcttgaaaagatcaccgattatgcagctgaagat
gctgatattaccctgcagctcaaagaagcttttacgcctcttttagcgaagaaagaagtg
cagcgtgtttttgatgaagtagaaaatcctttactgcgtgtacttactgatatggagttt
gaaggcgtgcgaatagatgagggttttctgaaggcctattcacaggagctggaaaaggac
gcaatagaagcggaaaaaaaagtgtttgagattgccggcgttcgttttaacctggcttca
ccaaaacagctgggcgaggttttgtttgataaactaaaactcgatgcttcggcccgcaaa
acaaagacgggtcaataccagacaggggaagatgttttattgaaactggccgccaaaggt
catgccattgcagatgcgatcattactttcagggaactgaccaagttaaaatctacttat
gtagatgcattaccccagctgatcaaccctagaaccggcagggtgcataccacatacgga
caggcggtagctgttacgggcaggctggctagtaataatcccaacctccagaatatacct
gtaagaaccgatcggggtaaagaaataagaaaggcctttgtacctcgcgatgccaatcat
atattattatcggcggattattcgcagatcgaactaagaattgtggccggtatcagcggc
gatgaaaatatggtgaacgcatttaaaagcggcgtggacattcatacagcaacggcggcg
caggtgtttaatgtagccgtggaagacgtaaccaaagaaatgcgctataaagccaagagc
gtcaacttcggtatcatttatggacagggggctttcgggctggccgataacctgggcatt
tcacgaacagaggccaaagcgatcattgatagttataaaaaagagttttcaggtatacag
cgctatatggatgataccatcaattttgcgcgcgagcatggctatgtgcagacattgatg
ggccgcaagcgttggttaaaagatatcaattcgggaaactttaccgtaaggggatttgct
gagcgaaacgccattaattctcccattcaaggtactgctgccgacatgatcaaactggcc
atgcaaaaagtgcatgcagctatgaaaaaagccggtatgaagagtaaaatgattctgcag
gtgcacgatgaattaatatttgacactttgcgcgaagaggtaaacgaattaaaaccatta
atactggagaacatggaagccgcgctgccactgccttttggcgtgccggtgattgcagag
tgcggccagggagaaaactggctggaagcgcattaa
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