Niabella yanshanensis: U0035_13490
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Entry
U0035_13490 CDS
T09723
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nyn
Niabella yanshanensis
Pathway
nyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U0035_13490 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nyn03019
]
U0035_13490 (recQ)
03400 DNA repair and recombination proteins [BR:
nyn03400
]
U0035_13490 (recQ)
Enzymes [BR:
nyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0035_13490 (recQ)
Messenger RNA biogenesis [BR:
nyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
U0035_13490 (recQ)
DNA repair and recombination proteins [BR:
nyn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
U0035_13490 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
RecQ-1-like_HTH
RecQ_Zn_bind
HRDC
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
WQD36680
UniProt:
A0ABZ0W095
LinkDB
All DBs
Position
complement(3236756..3239017)
Genome browser
AA seq
753 aa
AA seq
DB search
MGVKSAKAAPKKAKKEPEQKPKAKIDLQKELQKHFGFKQFKGKQEAIIESLLAGNDTFVI
MPTGGGKSLCYQLPAVMLKGVAIIVSPLIALMKNQVDLVRGYNSNDEVAHFLNSTLNKKE
IKEVHDDLLSGKTKLLYVAPETLTKQENLAFFSDLDISFFAVDEAHCISEWGHDFRPEYR
RLREMMDQINDQVPVIALTATATPKVQSDIVKNLDLRNPNIFISSFNRENLYYEILPKIK
KNQTDESIVRFIKGMKNKSGIIYTLNRKTTEELASILEANGIKAVAYHAGLDAKLRAKRQ
DDFLNEDVQVIVATIAFGMGIDKPDIRFVIHYNIPKSIENYYQETGRAGRDGLEGKCVLY
YSHKDVSKLEHLMRDKPLSEREVGAQLINETVAYAESGVCRRKVILSYFGEHYLEDNCGN
CDNCKNPKEKIEAKAEVLVTLKALKELDERFATDYLVNIVSGKLTPQVKMFRHEGLSSFG
AGKEHDAHFWNSLIRQMILEGLIRKDIEEYGVLKVTDKGNDFTKKPKSFTIVLNNKFEDA
VGDDEEGGDGNGEAATTDDKLFEMLKELRHKQAKKVNLVPWVIFLETSLQDMATLYPTTL
QELEKCQGVSGAKARRYGKPFIELIARYVEENNIVKPDDFVMKSVVNKSGNKVYIIQQTD
KKIPLETIAKNKGWKISELLEEMETIAASGTKLNLGYAIDEMLDEADQEEIIEYFKTCET
SSLDVAQQELSEFDFNWEQLKIMRIKFLAEYGM
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgggagttaaatcagcaaaagcggctccaaaaaaagccaaaaaagaacctgagcaaaag
cctaaggctaaaatagacctgcaaaaagagttgcagaagcatttcggattcaaacaattt
aaaggcaagcaggaagctattatcgagtctttacttgccggcaatgatacatttgtaata
atgccaaccggcggcggaaagagtttatgctaccagctgccggcagtgatgctaaaaggg
gttgcaattattgtttctccacttattgccctgatgaaaaaccaggtggacctggtaaga
gggtataacagtaacgacgaagtagcccattttctaaattcaacactcaataaaaaagaa
ataaaagaggttcatgacgacctgttgtccggcaaaacaaaattgctttatgtggcaccg
gagaccctgaccaaacaggaaaatctggctttcttcagcgatctggatatttctttcttc
gcggtggatgaagcacactgtatcagtgaatggggtcatgacttccggcctgaatacagg
agacttcgggagatgatggaccagatcaatgaccaggttccggttattgctttgacagct
acggctacgccaaaagttcagagcgatattgtaaaaaacctggacctgcgtaatcccaac
atttttatttcttctttcaaccgggaaaatctttattatgaaattcttcccaagataaaa
aagaatcaaacggatgagagcatcgtgcgttttatcaagggaatgaagaataagagcggg
atcatttatacgctcaaccgtaaaaccaccgaggagctggcaagcattttagaagcgaat
ggtattaaggcggttgcctaccacgccggtcttgatgcaaaactgcgtgccaaacgccag
gatgactttctgaacgaagatgtgcaggttattgtagccactatcgcttttggaatgggg
attgacaaacccgatatccggtttgttattcattataatatacccaaatcgattgagaat
tattaccaggaaacaggccgtgccgggcgggatggcctggaaggtaaatgcgtgctgtat
tattctcataaagatgtgagcaaactggagcatttaatgcgtgataagccacttagcgaa
cgcgaagtaggcgcacagctgatcaatgaaacggtggcctacgccgaaagtggtgtatgt
cgtaggaaagtgatcctgagttattttggcgaacattacctggaagacaattgcggcaat
tgtgataactgtaaaaatcctaaagaaaaaattgaagctaaagccgaagttctggtgact
ttaaaagcacttaaagaactggatgagagatttgctacggattacctggttaatattgtt
agcggtaagctcacaccgcaggtaaaaatgttccggcatgagggtttgagtagttttggt
gcaggtaaggaacatgatgctcatttctggaactccttgattcgtcaaatgatcctggaa
ggactcatcaggaaagatattgaagaatatggcgttttgaaggtcaccgacaaaggcaac
gattttacgaagaagcctaaaagcttcactattgtattgaataataagtttgaagatgcg
gtgggtgacgatgaagagggcggagatggaaacggagaggccgccactacagatgacaag
ttatttgaaatgctgaaagagctgcgccacaagcaggctaagaaagtaaacctggttccc
tgggtaattttcctggaaacttcgcttcaggatatggctacgctctacccaactacattg
caggagcttgaaaaatgccagggtgtaagcggcgcaaaggcaaggcgttacggaaagccc
tttattgagctgattgcccgttacgtagaggaaaacaatattgtgaagccggatgatttc
gtaatgaaaagcgtggttaacaaaagcggcaataaagtttatattatccagcaaacggat
aaaaagataccgctagaaactattgcgaaaaataagggatggaagatatcggagcttttg
gaagaaatggaaactattgccgccagcggaaccaaactcaacctgggttacgccattgac
gaaatgcttgatgaagcggatcaggaagagatcatcgagtatttcaaaacctgcgaaact
tcatcgctggatgttgcacagcaggagctgtctgagtttgattttaactgggagcaactt
aagatcatgcgaattaagtttctggctgaatatgggatgtaa
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