Niabella yanshanensis: U0035_15645
Help
Entry
U0035_15645 CDS
T09723
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
nyn
Niabella yanshanensis
Pathway
nyn00521
Streptomycin biosynthesis
nyn00523
Polyketide sugar unit biosynthesis
nyn00525
Acarbose and validamycin biosynthesis
nyn00541
Biosynthesis of various nucleotide sugars
nyn01100
Metabolic pathways
nyn01110
Biosynthesis of secondary metabolites
nyn01250
Biosynthesis of nucleotide sugars
Module
nyn_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
U0035_15645 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
U0035_15645 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
U0035_15645 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
U0035_15645 (rfbB)
00525 Acarbose and validamycin biosynthesis
U0035_15645 (rfbB)
Enzymes [BR:
nyn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
U0035_15645 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
NmrA
Motif
Other DBs
NCBI-ProteinID:
WQD37106
LinkDB
All DBs
Position
3788558..3789613
Genome browser
AA seq
351 aa
AA seq
DB search
MAKKTIVITGGAGFIGSHVVRLFVTKYPDYKIVNLDALTYAGNLENLKDIQDQPNYIFEK
ANIVDAEAVKAVFQKHNPDGVIHLAAESHVDRSITSPLDFVYTNVIGTVNLLNATKELWK
DNYEGKRFHHVSTDEVYGALGDTGFFTEETSYDPHSPYSASKASSDHFVYAYADTYGLPV
VLTNCSNNYGPNHFPEKLIPLMIHNIINNKPLPVYGDGKYTRDWLYVIDHARAIDLVFHE
GKGSEKYNVGGFNEWKNIDLVKLLCQQMDEKLGREAGTSEQLITFVKDRPGHDLRYAIDA
TKINKELGWSPSVTFEEGLSKTIDWFLSNKEWLENVTSGDYQNYYNKQYAE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaagaccattgttattacgggtggggctggttttattggctcacatgtggtg
agattatttgtaactaagtatcctgactataaaatagtgaaccttgatgcccttacttac
gcgggtaaccttgagaatctgaaagacattcaggatcagcccaactatatttttgaaaaa
gccaatattgtagacgctgaagcagtgaaagctgtttttcaaaagcataatcccgatggc
gttattcaccttgccgctgaaagtcatgtagaccgatcaatcacctctccattagatttt
gtatatacgaatgtaatcggtacggtaaacctgttgaacgctaccaaagagctgtggaag
gacaattatgagggcaaaagatttcatcatgtatcaactgatgaggtatacggcgcttta
ggggataccggttttttcacagaagagacttcttacgatcctcattctccttattctgca
tctaaagcttcttcagatcattttgtatacgcttatgctgatacttatggtcttcctgta
gttttaaccaactgctccaacaattatggacctaaccatttcccggagaagttaattccg
ctgatgattcataatatcatcaacaataagccgcttccggtttatggagatggtaagtac
acccgggattggttgtatgtaattgaccatgcaagagccatcgacctggttttccatgaa
gggaaaggcagtgagaagtacaatgtgggaggctttaatgagtggaagaatattgatttg
gtaaagctgctttgccaacaaatggatgaaaaattgggccgtgaagcaggcaccagtgag
caactgatcacttttgtaaaagaccgtcccggtcacgatttacgatacgcgatcgacgcc
accaaaatcaacaaagaattaggctggtctccttccgtaacctttgaagaaggtttgtcc
aaaaccatcgactggtttttaagcaataaagaatggcttgaaaatgtaaccagtggtgat
tatcagaactattataataaacagtacgcagaataa
DBGET
integrated database retrieval system