Niabella yanshanensis: U0035_15850
Help
Entry
U0035_15850 CDS
T09723
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nyn
Niabella yanshanensis
Pathway
nyn03410
Base excision repair
nyn03430
Mismatch repair
nyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
U0035_15850 (recJ)
03430 Mismatch repair
U0035_15850 (recJ)
03440 Homologous recombination
U0035_15850 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nyn03400
]
U0035_15850 (recJ)
DNA repair and recombination proteins [BR:
nyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
U0035_15850 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
U0035_15850 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
U0035_15850 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WQD37144
LinkDB
All DBs
Position
complement(3832974..3834674)
Genome browser
AA seq
566 aa
AA seq
DB search
MTKRWNILESDTNEVSFLQGELKINATLCRILVQRGIKNFEQAKDYFRPQLSHLHNPWQM
KDMAKAVNRIIKAFDGNEKILVFGDYDVDGTTSVASMYSFIRKLHSEVAFYIPHRYKEGY
GVSKAGIDFAKENNFSLIIALDCGIKSVDLINYANTLGIDFIVCDHHLPDEIIPDAIAIL
NPKQKDCDYPFKDLCGCGVGFKLMCALCEQMGIPLENALDYLDLVATAIAADIVPMNGEN
RVLAFYGLIKANENPNLGIKALATLGGAKQPLHINDLVFMIAPRVNAAGRMDDASKAVRL
FIAATQEEALYYAEQLHNDNTDRKEADTDITAEALTLISENQLWVERRSTVVYQPHWHKG
VVGIVASRLIEHHYKPTVVLTESGHYAAGSARSVPGFNLYEAIHACREFLLAYGGHFAAA
GLTLEKHNVDLFRAKFEEVVSATIREEHLVPEIVINSVISFKEITTSFYNILRQMEPFGP
ENMTPVFIARNVVDTGYSKIVKENHLRLVVKQEDLTFTGIGFNMADKLGIVKDRHPFDLV
FKIDENDWNGQKTLQLRIEDIKASEA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaacgctggaatatactggaatccgatacgaatgaagtatcatttttacagggc
gaacttaaaataaatgccaccctttgccgcatcctggtgcaaagaggtataaagaatttt
gagcaggcgaaagattatttcaggccgcaactttctcacttacataatccatggcagatg
aaggatatggcgaaggccgtaaaccggattataaaagcatttgacggaaatgagaaaata
ttggtatttggggattatgatgtagatggcaccacctcagtagccagtatgtatagtttt
atcagaaaactgcatagcgaggttgccttttatatcccacaccgctataaagaaggctat
ggtgtcagcaaagcagggatagatttcgcaaaagaaaataatttttccttgattattgcg
ctggattgtggaatcaagtcggtagacctgatcaattacgccaacacccttggcattgat
tttattgtctgcgatcatcaccttcctgacgaaataattcctgatgccattgctatatta
aacccgaagcagaaagactgcgattatccttttaaggatctatgtggttgcggtgttgga
tttaagttaatgtgtgccttgtgcgaacaaatgggtatcccgctggaaaatgcattggat
tatctcgacctggttgccactgcaatagcagcagacattgtacctatgaacggagaaaac
cgggtactggcattttatggattaataaaagccaacgaaaaccctaacctgggcatcaaa
gcgctggctactttaggtggcgcaaaacaaccattacatattaatgaccttgtctttatg
atcgctccccgggtcaatgccgcggggcgaatggacgacgccagcaaagcagtaaggctt
ttcatagctgccacacaagaggaggccttatactatgcagaacaattgcataatgataat
acggatcgtaaagaagcggatactgatataaccgcagaggccttaaccctaatttcggaa
aatcaactctgggttgaaagacgatctactgttgtatatcaaccgcattggcataaaggc
gttgtaggtattgtagcctcgcggctgattgaacaccattataaacctacagtggtgcta
acagagagtggccattatgcggccggaagcgcgagaagtgttccgggcttcaatctgtat
gaggccattcatgcctgcagagagttcctgcttgcttatggaggacattttgctgcagcc
ggcctaacacttgagaagcacaatgttgaccttttcagggctaagtttgaagaagtagtg
tcagccacaatcagagaagagcatctggtccccgaaatcgtcataaattctgttatttct
tttaaagaaataacaacatctttctacaatatactgcgtcagatggagccctttggaccg
gaaaacatgacacctgtttttatagcccgtaacgttgttgatactggctatagcaaaata
gttaaagaaaatcatctccgtctggttgtaaaacaagaagacctgactttcacaggaata
ggttttaatatggccgataagctgggcattgtcaaagatcgccaccccttcgaccttgtg
tttaaaatcgacgaaaacgattggaatggtcaaaaaacactgcaactacgtatagaagat
atcaaagcttctgaagcctga
DBGET
integrated database retrieval system
