Niabella yanshanensis: U0035_16560
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Entry
U0035_16560 CDS
T09723
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nyn
Niabella yanshanensis
Pathway
nyn03420
Nucleotide excision repair
nyn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
U0035_16560
03430 Mismatch repair
U0035_16560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nyn03400
]
U0035_16560
Enzymes [BR:
nyn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
U0035_16560
DNA repair and recombination proteins [BR:
nyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
U0035_16560
MMR (mismatch excision repair)
Other MMR factors
U0035_16560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
ResIII
PhoH
DEAD
Motif
Other DBs
NCBI-ProteinID:
WQD37283
UniProt:
A0ABZ0W1Y7
LinkDB
All DBs
Position
complement(3990766..3993123)
Genome browser
AA seq
785 aa
AA seq
DB search
MQDYIKGLNERQKEAVLHIQGPIMIIAGAGSGKTKVLTTRIAHLMASGIDAFNILALTFT
NKAAREMKERIEHILGGNEARNLYIGTFHSVFARILRAEAHRIGYPNNFTIYDTDDAKSV
VKAVINEMHLDDKLYKPSQVYNRISSAKNALVSPADYATDYYVQQEDIRANRPAIAKIYD
SYCKRCFKNGAMDFDDLLLKFYELLKTNPESLSKYQHKFKFILIDEYQDTNPAQYEVIKL
LGAMHENVCVVGDDAQSIYSFRGATIQNILQFQKDYDEVKVVKLEQNYRSTQTIINAAND
VIGKNKGQIPKVLFTENAEGEKIRIVKTMSDNEEGKFVADSIQEQKLRNHFLNKDFAILY
RTNAQSRAFEEALRRMAIPYTMYGGVSFYQRKEIKDLVAYLRLIINSRDEEALKRIINYP
VRGIGKTTIDKIILLANTHNKTMWEILVEAAQHGFRAGTLEVINNFVTMIRSFSSMLEKH
NAYEVAFHVGKNTNLVRELFNDKSTEGLQRYENIQELLNSIKEWVESPDNEDGEVVDKGL
GAYLQQITLLTDADEKDPDADTVKLMTIHAAKGLEFECVFAAGLEEMLFPNAMSINTREE
LEEERRLFYVVVTRAKKKLWVTYANTRYKFGQLVQNEPSRFIEELPEQLLDRSYAGGGTK
MSNNFGGSAFERMNSGFGGGWSGGKKAAEDAEKRYGPPPSKKSATPSYLPPKMEKKVTDH
TPTENFVANEVTELAVGQKVEHQKFGFGEIIKMEGASHNPMAIIKFETNGEKKILLNYAR
LRIVG
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattatataaaaggtttgaacgagcggcaaaaagaagcagtattacatattcag
ggtcccattatgattatcgcgggtgcgggaagtggtaaaaccaaggtattaaccacacgt
atcgcccatttgatggccagtggtattgacgcctttaatatactggcgctgacatttacc
aataaagcagcgcgggagatgaaagagcgtatagaacatattttaggtggaaacgaagca
cgtaatttatatataggaacttttcacagtgtatttgctagaattttaagggcagaagca
cacaggatcggttatcccaacaatttcactatttatgataccgacgatgccaaaagcgtg
gttaaagcagtgatcaacgaaatgcacctggatgataaattgtataaaccatcacaggtg
tataaccgtatatcctctgccaaaaacgcgctggtatcgcccgccgactatgcaacagac
tactatgtacagcaggaagatatccgtgccaaccggccggcaattgctaaaatttacgat
tcttattgcaagcgctgttttaaaaacggcgctatggattttgatgacctgttgcttaaa
ttttacgaattacttaaaactaatcccgaatctttaagcaaataccagcataaatttaaa
tttatactgattgatgagtaccaggataccaacccggcccagtatgaggtaataaaacta
ctgggggccatgcatgaaaatgtttgcgtggtgggagatgacgcccagagtatttatagc
ttccggggcgctaccatccagaatattttacagtttcagaaagactacgatgaagtaaaa
gtggtaaagctggagcaaaactatcgtagcacacaaacgatcatcaacgcggccaatgat
gtaattggtaaaaacaagggacagatcccaaaagtgctgtttaccgaaaatgcggaaggt
gagaagatcaggattgtaaaaaccatgtcggataacgaagaaggaaagtttgtagccgac
agcatacaggaacaaaagctgcggaaccatttcttaaataaagatttcgcaatactatat
cgtaccaatgcccaaagccgggcttttgaggaagcgttaagacgcatggcgattccttat
accatgtatggtggtgtgagcttttaccagcgcaaggagattaaagacctggtggcttac
ctgcgcctgatcattaatagccgtgatgaggaagccttaaaacgtatcattaattacccc
gtacgtggcatcggtaaaacgaccatagataaaattatattgctggccaatacccacaat
aaaaccatgtgggagatactggtggaggctgctcaacacggcttccgggccggtacactg
gaagtgatcaacaatttcgtgaccatgatcaggagtttttccagcatgctggaaaagcac
aatgcctatgaagttgcgtttcacgtgggcaagaataccaacctggtgcgggaattgttc
aatgacaaaagtactgaagggttacaacgatacgagaacatacaggagttgctcaactct
attaaagaatgggtagaaagcccggataacgaagatggagaagttgtagataaaggcctg
ggggcatacctgcagcagatcactttactgaccgacgcagacgaaaaggaccccgatgcg
gataccgtaaagctgatgaccattcacgcagcaaaaggtttggaatttgaatgcgtattt
gcagcagggctggaagaaatgttatttcccaacgctatgagcatcaatacccgggaagaa
ctggaggaagaacgcaggcttttctatgtggtagtaacgcgggctaaaaagaaactatgg
gttacctatgccaatacccgttataaatttgggcaactggtgcaaaatgagcccagccgg
tttatagaagaactgccggagcaactgctggaccgtagttatgcggggggtggcacaaaa
atgagcaacaattttggcggcagcgctttcgagcgcatgaacagtggatttggcggaggt
tggtctggtggcaaaaaagctgccgaagatgcggaaaaacgttacggtccgccaccaagc
aaaaagtcagctaccccaagttacttacctcccaaaatggaaaaaaaggtgacagaccac
acacctacagaaaacttcgtagccaatgaggttaccgaattagcagtgggacaaaaagtg
gagcatcagaaatttggatttggagagatcatcaaaatggaaggcgccagccacaatccc
atggccatcattaaattcgaaaccaacggcgaaaagaaaattctcctcaattacgcccgg
ttaaggatcgtaggataa
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