Niabella yanshanensis: U0035_17595
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Entry
U0035_17595 CDS
T09723
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nyn
Niabella yanshanensis
Pathway
nyn03030
DNA replication
nyn03430
Mismatch repair
nyn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
U0035_17595 (dnaE)
03430 Mismatch repair
U0035_17595 (dnaE)
03440 Homologous recombination
U0035_17595 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nyn03032
]
U0035_17595 (dnaE)
03400 DNA repair and recombination proteins [BR:
nyn03400
]
U0035_17595 (dnaE)
Enzymes [BR:
nyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
U0035_17595 (dnaE)
DNA replication proteins [BR:
nyn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
U0035_17595 (dnaE)
DNA repair and recombination proteins [BR:
nyn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
U0035_17595 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
WQD37487
UniProt:
A0ABZ0W7J0
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All DBs
Position
4221906..4225577
Genome browser
AA seq
1223 aa
AA seq
DB search
MKFSHLHVHTQYSLLDGAAPIGNLYKKAIKDGMPALAISDHGNMFGVFQFVAEAYKNLDE
NGKPKVKPVVGCEFYVVENRLEKTFTKDKKDKRYHQILLAKNEQGYRNLTKLTSLGFIEG
LYGKYPRIDKGLILQYHEGLIATTCCLGASVPQAILRKGEAEAEQEFKWWLDLFGEDFYV
ELQRHDIPDQEKVNEVLIRFAAKYKVPIIASNDSHYVDQEDANAHDILLCINTGEKQATP
KFKGDFGDEDANSKGSRFAFANDQFYFKTTEEMTQLFHDIPEAIDNTNAIVDKIELLDLK
RSILLPNFPIPQEYKTHTQDQKTEKGDVMSADSLNQWEFLKHLTYEGARERYGLAFEGDV
KERIDFELFTIKTMGFAGYFLIVSDFIKAGRDSGVFIGPGRGSAAGSVVAYCIGITNIDP
IKYNLLFERFLNPDRKSMPDIDTDFDDEGRQKVIDYVVQKYGKSQVAQIITYGTMAAKMS
IKDVARVMDLPLSDSNALAKLIPEKPGISLKRVLHAPMSPKDGEKSLSEKEGLASEDLDS
VRRIREIYNGSDLQAKVLHEAEILEGSVRNTGIHAAGIIIAPKDLTELLPVSTAKDSDLW
VTQIEGSVIEEAGVIKMDFLGLKTLTIIKNALQLIKLNYGIEIDIDSIPLDDEKTYQLYQ
KGETNATFQFESPGMQKHLRDLKPDKFADLIAMNALYRPGPLQYIPNFIKRKHGAEEITY
DLPEMEEYLAETYGITVYQEQVMLLSQSLGGFSKGDADILRKAMGKKQKAVLDKMKKQFI
DGAVQKGHPADKLEKIWTDWEAFAQYAFNKSHSTCYAFVAYQTAYLKAHYPSEYMAAVLN
NAGSLEKITFFMEECKRMTLEVLGPDINESLKGFAVNKKGEIRFGLGGLKGVGEAAVESI
IAERENGAYPSIFDMVKRVNQRTVNKKTMESLAYAGAFDCFTDIHRAQYFFTPPNDNMNG
LEKIIKYGQVCQTQSQTSSNTLFGDLAESMEIQVPKIAECEPWPLVVQLDNEKEVTGIFV
SGHPLDDYRFEMENYGISKIGYVNEFKEDKEKVNSSATFKLMALVSDAQHRVAKSGNKFG
SFVLEDYSGKLEVVLFSEDYLKHSAILQLGATVYVTGFFKQRFNGDFDFKISSICLAESV
KKNMTKKLTLQLPAAEITENMIDFVQQNLKSNKGPSALNLKIVDEAENIEVELLTNGKGF
EMNSELIGFLKDRENWKVKVECN
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctcacatttacacgttcatacacaatattcactgctggatggggccgcacct
atcggcaacctgtacaaaaaagcgataaaagacggaatgccggcgttggcgatcagtgat
catggcaacatgtttggtgttttccaatttgttgcagaagcctataaaaacctggatgag
aacggaaaacctaaagtgaagcccgtggtgggttgcgaattctatgtagtagaaaatcgt
cttgaaaaaacttttaccaaggacaaaaaagataaaagatatcaccagattttactcgcc
aaaaatgagcagggatatcgtaatctgaccaaactcacttcgctggggtttatcgaaggg
ttgtacggcaaatacccccgtattgacaagggcctgatcctgcaataccatgaagggttg
attgccactacctgttgcctgggggcctccgtaccgcaggccattttgagaaaaggagag
gcagaagccgaacaggaatttaaatggtggctggacctgtttggagaagatttttatgtg
gagctacagcggcatgatatccccgaccaggaaaaggtaaacgaggtgctgatcaggttt
gcggctaagtataaggtgcccattattgccagcaacgactcgcattatgtagaccaggaa
gatgcgaacgcccatgatatcctgctttgcatcaacaccggtgaaaagcaggccacgccc
aagtttaaaggggattttggcgacgaagatgcgaatagtaaaggatcccgctttgctttt
gctaacgaccagttttattttaaaacaactgaagaaatgacgcagttgtttcatgatatt
cctgaagcgattgacaataccaatgccattgttgataaaattgagttgctggatctgaag
cgcagcatattactgcctaatttccctattccgcaggaatataaaacgcatacacaggat
caaaagacagaaaaaggggatgttatgagcgccgactccctgaaccaatgggagtttctg
aagcaccttacttatgaaggagcgagagagcgttatgggctggcatttgaaggcgacgta
aaagaacggatcgattttgagctgtttaccattaaaaccatgggttttgccggttacttc
cttattgtaagtgattttattaaagcgggtagagatagtggcgtatttatcgggccgggg
cgcggttcggccgcgggttcggtggtagcctattgtatcggtattaccaatattgatcct
attaaatataacctgctttttgagcgttttctgaatcccgatcgtaaatccatgccggat
attgatacggatttcgatgatgaagggcgccagaaagtaatcgattatgtagtacagaaa
tatggtaaaagccaggtagcgcagatcattacttacggtacgatggccgctaaaatgagt
atcaaagacgtggctcgtgtaatggatctgcccttgtcagattctaatgcccttgccaag
ctgataccggagaaaccgggtatatcgttaaagcgggtattgcacgcgcccatgtcgccc
aaagacggtgaaaaatctctttcagaaaaagaggggctggcttctgaagatcttgatagc
gtaagaaggatacgggaaatatataatggcagcgatttacaggctaaggtattacatgag
gccgaaatcctggaaggatccgttcggaataccggtatccatgcagcgggtatcatcatc
gctccgaaagatcttaccgaattattacctgtaagtacagctaaagattccgatttatgg
gttacacagattgaaggcagtgtaattgaagaggcgggcgtaattaagatggacttcctg
ggtttgaaaacccttaccatcattaaaaatgcgctgcagctgatcaaattaaattatggt
attgagatagacatcgatagtataccgctggacgatgaaaagacttaccagttatatcaa
aaaggtgaaaccaacgcaacgttccagtttgaaagtccgggtatgcagaagcacttgcgc
gatctgaagcccgataaatttgccgatctgatcgccatgaacgccttgtatcgcccggga
cctttacagtacattcccaacttcattaaacgtaaacatggagccgaggaaattacctat
gacctgccggagatggaagagtacctggcagaaacttatggtatcaccgtgtaccaggag
caggtgatgttattgagtcagagcttaggagggtttagtaagggtgatgcggatatcttg
cgtaaagccatgggtaaaaagcaaaaggcggtactggataaaatgaaaaaacagtttatc
gacggagcggtacagaaagggcatcctgccgataagctggagaaaatatggacagactgg
gaggcgtttgcgcaatatgccttcaataagtcgcactccacctgttatgcctttgtagct
tatcagacagcctatttaaaagcgcattatcccagtgaatatatggccgcggttttaaat
aacgccggttcattagagaaaatcactttctttatggaagagtgtaagcgtatgacattg
gaagtattgggtcctgatattaacgaatcgctaaaaggttttgccgtaaacaaaaaagga
gagatccgttttggtttgggtggattaaagggtgtgggtgaagcagcggtggaaagtatt
attgctgaacgcgaaaacggtgcttaccccagcatttttgatatggtaaagcgcgtaaac
cagcgcactgtaaataaaaaaacgatggaaagcctggcttatgcaggggctttcgattgt
tttactgatatccacagagcgcagtacttctttacaccgcctaatgacaatatgaatgga
ctggagaagatcattaagtatggccaggtgtgtcaaacccagtcacaaacgagctcgaat
accttatttggagacctggcagagtcaatggaaatacaagtgcctaaaatagctgagtgc
gaaccctggccattggtggttcagctggataatgaaaaagaagtaacagggatttttgtg
agcgggcatcctttggatgactatcgtttcgaaatggaaaactacggcatatcgaagatt
ggttatgtgaatgagtttaaggaagacaaggaaaaagtaaactccagcgctacttttaaa
ctaatggccctggtgagtgacgcgcaacatagggtagccaagagcggtaataagtttggc
agttttgtacttgaagattatagcggtaagctcgaagtagtattgttttctgaagactat
ctcaagcactcagcgatattgcaactcggtgcgacagtttatgtcacaggctttttcaag
cagcgtttcaacggcgattttgattttaaaatatcatcgatttgcctggccgaaagcgtt
aagaaaaacatgactaagaaacttactttacaactacccgctgcagagattaccgaaaac
atgatagatttcgtgcagcaaaacctgaaatcaaataaaggcccctcagctttgaactta
aaaatagtagacgaggctgaaaatatagaagtcgaactcttaacaaatggcaaaggcttt
gaaatgaatagcgaactgatcgggtttttaaaagacagagagaactggaaagtgaaggtg
gaatgtaattag
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