Niabella yanshanensis: U0035_18515
Help
Entry
U0035_18515 CDS
T09723
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
nyn
Niabella yanshanensis
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nyn01002
]
U0035_18515
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nyn01011
]
U0035_18515
Peptidases and inhibitors [BR:
nyn01002
]
Cysteine peptidases
Family C82
U0035_18515
Peptidoglycan biosynthesis and degradation proteins [BR:
nyn01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
U0035_18515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WQD37668
LinkDB
All DBs
Position
complement(4439560..4441371)
Genome browser
AA seq
603 aa
AA seq
DB search
MNFRLSLLTTAFFMLLLSSCNLFEKTKEEEKQEREKIITKVDVTIDTSNSFNSLFIDTAE
VRGILAANQLNDTLINRLTSFYNSRNYQYAWFSKEGLPEHTVSFWNLLKNYLNYSKDSTV
YNKWLTDKMETLIRLERIRPKNDSLYQNVEILLTKYFYTYADHAFGSDPDFSIKSLEWYI
PKKKLTLEAMLDSVLTGHGQYADEYAPQNPQYLRLKDQLAKYKQIKDAGGWPNVNSKVEI
MKKGYTDAAVKTLKKRLKAEGFLFGEDSTFTNEYDSELAEAVNEIKKTYGYKPDGTAGKT
FLKDVNISVEERIQQILINMERMRWLPGNTKDSGRSIMVNIPEFKLHVYEYGQPAWDMDV
VVGKEGNNTTVFTGRLSNIVFSPYWNVPTSIVKNEMNGAPSAAYLARNHMEVIKGRVRQK
PGPWNSLGLVKFLFPNSYNIYFHDSPAKSLFNRDKRSYSHGCIRLKEPARLAEYILNDTA
RYSAQKVDSLMHTYKEKYVRVKKPIPVLITYFTSWVNDSSVLNFREDIYGHDAIIAKKMF
LNSVGTSYSRQKAIKDSIQKVKDLAKLKEQKKKDSIARKNEAIELKRKQDSIAAARKKKT
SGT
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgaattttagactatccctgcttacaacagctttctttatgcttttgctatcctcctgt
aacttgtttgagaaaacaaaggaggaagaaaaacaagagcgggaaaaaatcattaccaaa
gtagatgttactattgataccagcaactcctttaattctctttttatagacactgccgag
gtcaggggtattttagcagccaatcagctcaatgacactttgataaatcgcctgaccagc
ttttacaacagccggaattaccagtatgcctggttttcaaaggaaggcttacctgagcac
accgtttctttctggaacctgctgaaaaactacctcaattactctaaagactccaccgtt
tacaacaaatggctgacagacaagatggaaaccctgatccggctggaacggatccgcccg
aagaatgactccttataccagaacgtagaaatactgcttacgaaatacttttacacctac
gctgatcatgcttttgggtcagatccggactttagcataaaatcgctggaatggtatatt
cccaagaaaaaactcacacttgaggcgatgctggactcggtgttgaccgggcatggacag
tatgctgatgaatatgcccctcaaaacccgcagtacctgagattaaaagaccagttggca
aaatacaaacaaattaaagatgccggggggtggcctaacgtaaacagtaaggtggagatc
atgaagaagggctataccgatgccgctgtaaagaccctcaagaaaagattaaaagcggaa
ggctttttatttggggaagacagcacatttacgaatgagtacgacagcgaactggctgaa
gcggtgaacgaaatcaaaaaaacctacggttataaaccggacggtactgccggtaaaact
tttttgaaagatgtgaatatttcggtagaagaaaggatacaacagatattaattaatatg
gaacgtatgcgctggctgcctggtaataccaaagacagcggtcgctcgataatggttaac
attcctgagtttaaactacacgtatatgaatacggtcagccggcctgggatatggatgta
gtggtaggaaaggaaggcaacaatacaactgtatttaccgggcgcctgagtaatattgtg
tttagcccctactggaacgtgcccaccagcattgttaagaacgaaatgaatggagcaccc
agcgcagcttacctggcgcgtaaccacatggaggttattaaaggacgcgtaaggcagaag
cctggtccctggaattccctggggctggtaaagtttctatttccaaatagctacaatatc
tattttcacgactcacccgccaaaagcttgtttaacagggataaacgaagttatagtcat
ggctgtatccgcctgaaagagcctgcgaggctggccgaatatattttgaatgatacggca
aggtatagcgcccaaaaggtggacagcctgatgcatacctataaagaaaaatatgtcagg
gttaaaaaaccgatcccggtattgatcacttattttacttcctgggtaaatgacagcagc
gttttaaacttcagggaggatatttatggccatgatgccatcatcgcgaaaaaaatgttc
ctgaatagtgtaggcaccagctatagcaggcaaaaagcgattaaagacagtattcaaaaa
gtaaaagacctggcaaaactgaaggaacaaaagaaaaaggattctatagcccgcaaaaat
gaggcaatagagctaaaaagaaaacaggatagcattgctgcagcccggaagaagaaaaca
tccggcacataa
DBGET
integrated database retrieval system
