Niabella yanshanensis: U0035_21900
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Entry
U0035_21900 CDS
T09723
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nyn
Niabella yanshanensis
Pathway
nyn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nyn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U0035_21900 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nyn03019
]
U0035_21900 (pnp)
03016 Transfer RNA biogenesis [BR:
nyn03016
]
U0035_21900 (pnp)
Enzymes [BR:
nyn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
U0035_21900 (pnp)
Messenger RNA biogenesis [BR:
nyn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
U0035_21900 (pnp)
Transfer RNA biogenesis [BR:
nyn03016
]
Prokaryotic type
tRNA degradation factors
U0035_21900 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_RRP5
KH-I_KHDC4-BBP
KH_Vigilin
KH_2
Motif
Other DBs
NCBI-ProteinID:
WQD38330
LinkDB
All DBs
Position
5312979..5315153
Genome browser
AA seq
724 aa
AA seq
DB search
MLQQPLRTTFDLGDGREVAIETGRLARQADGSVTVSVGKAVLLATVVANKEPKEGQSFFP
LTVDYQEKFASAGRIPGSFFKREGRLSDYEVLISRLIDRALRPLFPDDYFCEVQVLVTLI
SSDPEILPDALACLAASAALAVSDVPIKEILSEVRVARIDGAFKINPGRTELENADMDFI
VAATEKNLMMVEGESQECSEADLVAALGVAHDAIRVQIKAQQQLRDLKGVTTKREYTLPA
INEAVKERVYAFASDKVYEIAKSKSAKHDRTDQFKALEEELLAKLVEESTEELPFTDVEK
RLAKKYYHDVQYDVVRDMVLNDRIRLDGRQLDEIRPLDMEVDVLPSPHGSALFTRGETQS
ITTVTLGTGLDELLIETAASSKYSKFILHYNFPPFSTGEVKMMRGPGRREVGHGNLAMRS
LKQMMPADSEFGYTVRVVSDILESNGSSSMATVCAGSLALMDAGVPFPKHVAGIAMGLIT
KGDKFSILSDILGDEDHLGDMDFKVTGTREGICGVQMDIKVDGLPMEVMSQALEQAKAGR
LHILEHMYKAIPEAREEVKPHAPRVVKMFIDKEFIGAVIGPGGKVIQEIQRETGATINIE
EVNNMGEISIFGVEKSSVSKAEDWIKGIVAVPVVGDVYDATVKSIVAFGAFVEFLPGKQG
LVHISEVSWKRLETLEGLVKEGDSMKVKLIGTDPKSGKFKLSRKALIPKPERKPEPGEES
PSAN
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgttacaacaaccattaagaacaaccttcgatttaggcgatggccgcgaagttgctata
gaaacagggcgccttgcccgccaggcggatggctcggttacggtaagcgtaggtaaagca
gtattgctggctaccgtagttgcgaataaagaacccaaagaaggacagagcttttttcct
ttaactgttgattaccaggagaaatttgcttctgcaggtcgtatcccgggctccttcttc
aagcgtgaaggccgtttgagcgactacgaggtattgatctcacgcctgattgaccgcgcc
ttaagacctttattccccgatgattatttctgcgaagtacaggtactggttaccttgatc
agcagtgatcctgaaatactaccggatgcattagcttgtttggctgcatctgctgctttg
gcagtatctgatgtgcccattaaggaaattttgagtgaagtacgtgtagcccgcattgat
ggcgctttcaaaataaaccctggcaggacggaattggagaatgctgatatggactttatt
gtggctgccactgaaaagaacctgatgatggtagaaggtgagtcccaggagtgttctgag
gctgacctggtagctgctttgggtgtggcccatgacgctatccgggttcagatcaaagcg
cagcaacagctaagagacctgaaaggtgtaaccactaaaagagaatacacgcttcctgct
atcaacgaagctgtgaaagaacgtgtatatgcttttgcgagcgataaagtatatgagatc
gctaaaagcaaatctgcaaagcacgacagaacggatcagtttaaagcattggaagaagaa
ttgctggctaaattggttgaagagtcaacggaagagcttccttttacggatgttgaaaaa
agactggctaaaaaatattaccatgatgttcagtacgatgtggtaagagacatggttttg
aacgatcgtatccgcctagacggcaggcagctggatgaaattcgcccattagatatggag
gtggatgtactgccttctccgcacggatctgctttatttaccagaggtgaaactcagtct
attacaactgttaccttaggtactggtttagatgagttgttgattgaaaccgcagcctct
tctaaatactctaaatttatcctgcattataatttcccgccgttttcaaccggtgaggtg
aaaatgatgcgtggacctggtcgcagggaagtaggtcatggtaacctggccatgcgttca
ttaaagcaaatgatgcctgctgattctgaatttggttataccgttcgcgtagtaagcgat
atcctcgaatctaacggatcttcttcaatggctactgtttgtgccggttctctggcatta
atggatgcaggtgtaccttttccaaaacatgtggcaggtatagctatgggattgattacc
aagggtgataaattttctatcttaagtgatattttaggtgatgaagaccatttaggagac
atggacttcaaagtaaccggtacacgcgaaggtatttgcggggtgcagatggatattaaa
gtagatggccttcccatggaagtaatgagccaggctttagagcaggcgaaagcaggccga
ctacacatcctcgaacatatgtacaaggctattccggaagcaagggaagaagtgaaacct
catgcaccacgtgtggttaagatgtttatcgataaggaatttattggtgcagtgatcggg
ccaggcggtaaagtgatacaggaaattcaacgtgaaacaggagcaacgatcaatatcgag
gaagtaaacaatatgggtgagatcagcatctttggggtggagaaatcatctgtatctaaa
gcagaagactggatcaaaggcattgttgccgttccggttgtaggtgatgtttacgacgcc
acggtaaaatcaatagttgccttcggagcgtttgtagaattcttaccaggaaaacaaggt
ttggttcacatcagtgaagtaagctggaaacgtttggagaccctggaaggattggtaaaa
gagggagactccatgaaagtaaaactgattggaacagatcctaagtcgggtaaatttaaa
ttgtcgaggaaagctttaattcctaaaccggagagaaaaccggaaccgggagaagaaagt
ccttccgctaattaa
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