Nocardia yunnanensis: D7D52_00085
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Entry
D7D52_00085 CDS
T09774
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nyu
Nocardia yunnanensis
Pathway
nyu03420
Nucleotide excision repair
nyu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D7D52_00085
03430 Mismatch repair
D7D52_00085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nyu03400
]
D7D52_00085
Enzymes [BR:
nyu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D7D52_00085
DNA repair and recombination proteins [BR:
nyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D7D52_00085
MMR (mismatch excision repair)
Other MMR factors
D7D52_00085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AYF78567
UniProt:
A0A386ZLW8
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All DBs
Position
complement(17821..19977)
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AA seq
718 aa
AA seq
DB search
MERVTAAPAQPPLRLDDLDAEQAAAVRAPRGPVCVLAGAGTGKTRTITHRIAHLVASGHV
RADQVLSVTFTARAAGELRNRLRALGLGGEAGQVQARTFHAAALRQLKYFWPQVVGDVPW
RLIDGKFPLAAQAAGRAGLPTDTDSLRDLISEIEWAKGSLIAPEDYAGEVGRRHRDVPYD
AKKVSAVYTYYEALKTTPDGLLLDFDDLLLHTAAALEDYSSVAEEFRGRYRCFVVDEYQD
VTPLQQRVLDAWLGDRDDLTVVGDANQTIYSFTGASPTFLLDFSRRFPDATVVRLERDYR
STPQVVSLANRVIGAARGRIAGTRLQLIGQRADGPEPTFAEFDDEPAEAAAVAKAVAKLL
GNGVPAAEIAILYRINAQSEVYEQALTEAGIPYQVRGGEGFFNRPEVRQAVSALRTAANR
DDLPDARGEKLVVLVRAALAQVGLTKEEPVGVQARERWSSLMALVQLTEELAEQDPDLEL
NGLLRELAARAEARHPPTVQGVTLASLHAAKGLEWDAVFLVGLADGTLPIQHVLGPDATV
SDEAALEEERRLLYVGVTRAREHLQLSWALARSAGGRKVRRRSRFLIGLVPDDSPASRIA
AHTTERRAGPKRQHPTCRICGRPLLTTQATMLGRCARCPADVDPELLVALQEWRREKADE
LSLPHFVVFSDTTLTAIAEQRPADDRALVAIPGIGAKKLQTYGADVLAIVRSRLRDSS
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcgtgactgccgcgcccgcccagcccccgctccggctcgacgacctcgacgcc
gagcaggccgcggccgtgcgcgcaccccgggggccggtctgtgtgctggcgggtgcgggc
accggcaagacccgcaccatcacccatcgcatcgcgcacctggtggcgtccgggcatgtg
cgcgccgatcaggtgctgtcggtcaccttcaccgcccgcgccgcgggcgaactgcgaaat
cgattgcgcgccttgggattggggggtgaggccgggcaggtgcaggcccgcaccttccac
gccgcggcgctgcggcagctgaaatacttctggccccaggtcgtcggcgacgtaccgtgg
cggctcatcgacggcaagttccccctggcggcgcaggccgcggggcgcgcgggcctgccc
accgacaccgacagcctgcgcgatctgatcagcgagatcgaatgggccaagggctcgctc
atcgcgcccgaggactacgcgggcgaggtcggccgccgccatcgcgacgtgccgtacgac
gccaagaaggtctcggcggtctacacctattacgaggcgctcaagaccacgcccgacgga
ctgctgctcgacttcgacgatctgctgctgcacaccgccgccgcgctcgaggactattcg
tcggtggccgaggagttccgcggccgctatcgctgtttcgtggtcgacgagtatcaggac
gtcacgccgttgcagcagcgggtgctcgacgcctggctgggcgatcgcgacgatctgacc
gtggtcggcgatgccaaccagaccatctactccttcaccggggccagtccgaccttctta
ctggacttctcgcggcgcttccccgacgccacggtggtccgcctggaacgcgattaccgg
tccaccccgcaggtggtgtcgctggccaaccgggtgatcggggcggcccgcgggcgcatc
gcgggcacccggctgcaactcatcggccagcgcgccgacggaccggaaccgaccttcgcc
gaattcgacgacgagcccgccgaggccgccgccgtcgccaaggcggtcgccaaactgctc
ggaaacggtgttcccgcagccgaaatcgcgattctctaccgcatcaacgcgcagtcggag
gtgtacgagcaggcgctcaccgaggcgggcatcccgtatcaggtgcgcggcggcgagggc
ttcttcaatcggccggaggtgcgccaggcggtctcggcgctgcgcaccgccgccaatcgc
gacgatctgcccgacgcccgcggcgagaaactggtcgtgctggtccgggccgcgctcgcc
caggtcgggctcaccaaggaggagccggtcggcgtgcaggcgcgggagcgctggtcgtcg
ctgatggcgctggtccagctcaccgaggaactcgccgaacaggatccggatctggaactg
aacggtctgctgcgggaactggccgcccgcgccgaagcccggcacccaccgaccgtgcag
ggcgtcaccctggcctcgctgcacgcggccaaggggctggagtgggatgccgtgttcctg
gtcggcctggccgacggcacgctgccgatccagcacgtcctgggtcccgacgcgacggtc
tcggacgaggccgcgctggaagaggaacgccgcctgctctacgtcggcgtcacccgcgcc
cgcgagcatctccaattgtcttgggcgctggcgcgttccgcgggcgggcgcaaggtgcgc
cgccgctcccgcttcctcatcggcctggtccccgacgattcgccggcctcgcgcatcgcg
gcccacaccaccgaacgccgggccggccccaaacgccagcacccgacctgccgcatctgc
ggccgccccctgctcaccactcaggccaccatgctcggccgctgcgcccgctgccccgcc
gacgtggacccggaactgctggtggcactccaggaatggcgtagggagaaggccgacgag
ctgtcactgccacatttcgtggtgttcagcgatacgaccttgaccgccatcgccgaacag
cgccccgccgacgaccgcgctctggtcgcgatcccgggcatcggcgccaagaagctgcag
acctacggcgcggacgtgctcgccatcgtccgctcgcgtctccgggactcttcctag
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