Entry |
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Name |
(GenBank) DEAD/DEAH box helicase
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KO |
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Organism |
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:nyu00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D7D52_00890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:nyu03019]
D7D52_00890
03009 Ribosome biogenesis [BR:nyu03009]
D7D52_00890
Enzymes [BR:nyu01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
D7D52_00890
Messenger RNA biogenesis [BR:nyu03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
D7D52_00890
Ribosome biogenesis [BR:nyu03009]
Prokaryotic type
rRNA helicases
D7D52_00890
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
complement(205718..207517)
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AA seq |
599 aa
MSTSPADSAPTDDERDVSGPSFADLGLDDRILRAIADVGYESPSPIQAATIPPLLDGHDV
VGLAQTGTGKTAAFAIPVLQGLNESGKAPKALVLAPTRELAIQVAEAFGRYATHMPGVHV
LPIYGGQNYAVQLSGLRRGAQVVVGTPGRVIDHLERGTLDLTELQYLVLDEADEMLKMGF
QEDVERILRDTPAEKQVALFSATMPTAIRKISKQYLKEPVEITVKTKTSTNTNITQRWVL
VSYQRKLDALTRILEVEPFEAMIIFVRTKQATEELAEKLRARGYSAAAINGDIAQAQRER
TIGQLKSGVLDILVATDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRSGEAL
LFVAPRERRLLDAIERATRQQVTEMQLPSVEDVNAQRVTKFHDAITENLNSANVPLFRKL
IEEYEREHNIPLADIAAALAVGGHEGDTFFMEPDPEPAPRERRDRDRGPRAFDERGPRER
REPSQHRQTGAELATYRISVGKRHKVAPGAIVGAIANEGGLRRSDFGHISIRPDHSLVEL
PADLSDETLNALSRTRISGQLIQLQLDQGPPGQQRPLSRAPRREFRDSKPRYERRKPRS |
NT seq |
1800 nt +upstreamnt +downstreamnt
atgagtacctcaccggccgacagcgctcccactgacgacgagagggacgtttccggcccg
tccttcgccgatctcggcctcgatgaccgcatcctgcgggccatcgcggatgtcggctac
gaatcgccgtcgcccattcaggcagcgacgattccgccgctgctggacggccacgacgtg
gtgggtctggcccagaccggtaccggtaagacggccgccttcgccatccccgtgctgcag
ggcttgaacgagtccggcaaggccccgaaggcgctggtgctggccccgactcgcgaactg
gcgatccaggtggcggaggcgttcggccggtacgccacgcacatgcccggcgtgcacgtg
ctgcccatctacggcgggcagaactacgcggtccagctgtcgggtctgcggcgcggcgca
caggtggtggtcggcaccccggggcgcgtcatcgatcacctcgagcgcggcaccctcgac
ctcaccgagctgcagtacctggtgctcgacgaggccgacgagatgctcaagatgggcttc
caggaggacgtcgaacgcattctgcgcgacacccccgccgagaagcaggtcgcgttgttc
tcggccaccatgccgacggcgatccgcaagatctccaagcagtatctgaaggaaccggtc
gagatcacggtcaagaccaagacctccaccaacaccaacatcacccagcgctgggtgctg
gtgtcgtatcagcgcaagctggacgcgctgacccgcatcctcgaggtcgagcccttcgag
gcgatgatcatcttcgtgcgcaccaagcaggccaccgaggagctggccgaaaagctgcgc
gcgcgtgggtattccgcggccgccatcaacggcgatatcgcgcaggcgcagcgtgagcgc
accatcggccagctcaagtcgggcgtgctcgacatcctggtcgccactgacgtggccgcc
cgcggcctggacgtggaccgcatctcgcacgtcgtgaactacgacatcccgcacgacacc
gagtcctacgtgcaccgcatcggccgcaccggccgcgcgggccgctccggtgaggcgctg
ctgttcgtggccccgcgcgagcgccggctgctggacgccatcgagcgcgccacccgccag
caggtcaccgagatgcagctgcccagcgtcgaggacgtcaacgcgcagcgcgtcaccaag
ttccacgacgccatcaccgagaacctgaactcggccaatgtgccgctgttccgcaagctc
atcgaagagtacgagcgggaacacaatattccgctggcggacatcgccgcggcgctcgcg
gtcggcggccacgagggcgacaccttcttcatggaacccgatccggagcccgcgccgcgg
gaacgccgcgaccgggaccgggggccgcgcgccttcgacgagcgtggaccgcgcgagcgc
cgcgagccgtcgcagcaccgccagaccggcgccgagctggccacctaccgcatctcggtg
ggcaagcggcacaaggtcgcgccgggcgcgatcgtgggcgccatcgccaacgagggcggc
ctgcgccgcagcgacttcgggcacatcagcatccggcccgaccattcgctggtggaactg
cccgccgacctctcggacgagaccctgaatgccttgagccgcacccggatcagcggccag
ctcatccagctgcagctcgaccagggcccgcccggacagcagcgccccttgagccgcgcc
ccgcgccgcgaattccgcgacagcaagccgcgttacgagcgccgcaagccgcgctcgtaa |