KEGG   Nocardia yunnanensis: D7D52_00890
Entry
D7D52_00890       CDS       T09774                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
nyu  Nocardia yunnanensis
Pathway
nyu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nyu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    D7D52_00890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nyu03019]
    D7D52_00890
   03009 Ribosome biogenesis [BR:nyu03009]
    D7D52_00890
Enzymes [BR:nyu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     D7D52_00890
Messenger RNA biogenesis [BR:nyu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     D7D52_00890
Ribosome biogenesis [BR:nyu03009]
 Prokaryotic type
  rRNA helicases
   D7D52_00890
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII AAA_19 CMS1 Cas3-like_C_2 UvrA_inter
Other DBs
NCBI-ProteinID: AYF72673
UniProt: A0A386Z612
LinkDB
Position
complement(205718..207517)
AA seq 599 aa
MSTSPADSAPTDDERDVSGPSFADLGLDDRILRAIADVGYESPSPIQAATIPPLLDGHDV
VGLAQTGTGKTAAFAIPVLQGLNESGKAPKALVLAPTRELAIQVAEAFGRYATHMPGVHV
LPIYGGQNYAVQLSGLRRGAQVVVGTPGRVIDHLERGTLDLTELQYLVLDEADEMLKMGF
QEDVERILRDTPAEKQVALFSATMPTAIRKISKQYLKEPVEITVKTKTSTNTNITQRWVL
VSYQRKLDALTRILEVEPFEAMIIFVRTKQATEELAEKLRARGYSAAAINGDIAQAQRER
TIGQLKSGVLDILVATDVAARGLDVDRISHVVNYDIPHDTESYVHRIGRTGRAGRSGEAL
LFVAPRERRLLDAIERATRQQVTEMQLPSVEDVNAQRVTKFHDAITENLNSANVPLFRKL
IEEYEREHNIPLADIAAALAVGGHEGDTFFMEPDPEPAPRERRDRDRGPRAFDERGPRER
REPSQHRQTGAELATYRISVGKRHKVAPGAIVGAIANEGGLRRSDFGHISIRPDHSLVEL
PADLSDETLNALSRTRISGQLIQLQLDQGPPGQQRPLSRAPRREFRDSKPRYERRKPRS
NT seq 1800 nt   +upstreamnt  +downstreamnt
atgagtacctcaccggccgacagcgctcccactgacgacgagagggacgtttccggcccg
tccttcgccgatctcggcctcgatgaccgcatcctgcgggccatcgcggatgtcggctac
gaatcgccgtcgcccattcaggcagcgacgattccgccgctgctggacggccacgacgtg
gtgggtctggcccagaccggtaccggtaagacggccgccttcgccatccccgtgctgcag
ggcttgaacgagtccggcaaggccccgaaggcgctggtgctggccccgactcgcgaactg
gcgatccaggtggcggaggcgttcggccggtacgccacgcacatgcccggcgtgcacgtg
ctgcccatctacggcgggcagaactacgcggtccagctgtcgggtctgcggcgcggcgca
caggtggtggtcggcaccccggggcgcgtcatcgatcacctcgagcgcggcaccctcgac
ctcaccgagctgcagtacctggtgctcgacgaggccgacgagatgctcaagatgggcttc
caggaggacgtcgaacgcattctgcgcgacacccccgccgagaagcaggtcgcgttgttc
tcggccaccatgccgacggcgatccgcaagatctccaagcagtatctgaaggaaccggtc
gagatcacggtcaagaccaagacctccaccaacaccaacatcacccagcgctgggtgctg
gtgtcgtatcagcgcaagctggacgcgctgacccgcatcctcgaggtcgagcccttcgag
gcgatgatcatcttcgtgcgcaccaagcaggccaccgaggagctggccgaaaagctgcgc
gcgcgtgggtattccgcggccgccatcaacggcgatatcgcgcaggcgcagcgtgagcgc
accatcggccagctcaagtcgggcgtgctcgacatcctggtcgccactgacgtggccgcc
cgcggcctggacgtggaccgcatctcgcacgtcgtgaactacgacatcccgcacgacacc
gagtcctacgtgcaccgcatcggccgcaccggccgcgcgggccgctccggtgaggcgctg
ctgttcgtggccccgcgcgagcgccggctgctggacgccatcgagcgcgccacccgccag
caggtcaccgagatgcagctgcccagcgtcgaggacgtcaacgcgcagcgcgtcaccaag
ttccacgacgccatcaccgagaacctgaactcggccaatgtgccgctgttccgcaagctc
atcgaagagtacgagcgggaacacaatattccgctggcggacatcgccgcggcgctcgcg
gtcggcggccacgagggcgacaccttcttcatggaacccgatccggagcccgcgccgcgg
gaacgccgcgaccgggaccgggggccgcgcgccttcgacgagcgtggaccgcgcgagcgc
cgcgagccgtcgcagcaccgccagaccggcgccgagctggccacctaccgcatctcggtg
ggcaagcggcacaaggtcgcgccgggcgcgatcgtgggcgccatcgccaacgagggcggc
ctgcgccgcagcgacttcgggcacatcagcatccggcccgaccattcgctggtggaactg
cccgccgacctctcggacgagaccctgaatgccttgagccgcacccggatcagcggccag
ctcatccagctgcagctcgaccagggcccgcccggacagcagcgccccttgagccgcgcc
ccgcgccgcgaattccgcgacagcaagccgcgttacgagcgccgcaagccgcgctcgtaa

DBGET integrated database retrieval system