Nocardia yunnanensis: D7D52_06800
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Entry
D7D52_06800 CDS
T09774
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nyu
Nocardia yunnanensis
Pathway
nyu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nyu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D7D52_06800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nyu03021
]
D7D52_06800
03400 DNA repair and recombination proteins [BR:
nyu03400
]
D7D52_06800
Enzymes [BR:
nyu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D7D52_06800
Transcription machinery [BR:
nyu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D7D52_06800
DNA repair and recombination proteins [BR:
nyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D7D52_06800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AYF73609
UniProt:
A0A386ZAT8
LinkDB
All DBs
Position
1419950..1423903
Genome browser
AA seq
1317 aa
AA seq
DB search
MLDVNFFDELRIGLATAEDIRNWSFGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITAVDDELRHNELSTLEAEMEVEKKTVADQRDADLEARAQKLEAD
LAELEAEGAKSDVRRKVKDGGEREMRQLRDRAQRELDRLDEIWTTFTKLSPKQLIVDEVL
YRELQDRYGEYFTGAMGAEAIQKLMETFDIDAEAENLRETIRTGKGQKKLRALKRLKVVA
AFQTNGNSPMGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPLLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPASGRPLAMPRLDMVTGLYYLTRLEEGAKGEYR
AATKDEAEFGVYSSPAEAQMAVDRGELTVRTLIKLRLTDQRPPKDVEAELFPNGWQRGDA
WTTKTTLGRVLFNDLLPADYAFIDEPMPKKRQAAIINDLAERYPMIVVAQTVDKLKDAGF
YWATRSGVTVSMSDVLVPTEKAEIMARYDAQADQIEKKYQRGALDHQERNNALVKIWQEA
TEEVGKALRAHYPPDNPIITIVDSGATGNFTQTRTLAGMKGLVTNPKGEFIPQPIKSSFR
EGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVRETDCGTERGIVVPI
AEKQPDGSLIRDAHVETSTFARTLATDALDAKGNVIIEKGHDLGDPALEALLDAGITEVK
VRSVLTCTTGTGVCATCYGRSMATGKLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGVA
GDDITGGLPRVQELFEARVPKGKAPIAEVSGRVRLEDDDRFYKITIIPDDGSDEVLYDKL
SKRQRLRVFKHEDGSERLLADGDHVEVGQQLLEGSADPHEVLRVMGPRQVQVHLVHEVQE
VYRSQGVSIHDKHIEVIVRQMLRRVTIIDSGATEFLPGSLVERAEFESSNRRVVAEGGEP
ASGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLIGLKENVIIGKLIPA
GTGINRYRNIQVQPTEEARQAAYAVPSYDDSYYSPDGFGTSTGAAVPLDDYGFSDYR
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacttcttcgatgaactccggatcggcctggcgaccgccgaagacatt
cgcaactggtcgtttggcgaggtcaagaagccggagaccatcaactaccgcacgctgaag
ccggagaaggacggcctcttctgcgagaagatcttcggtcccacccgggactgggagtgc
tactgcggtaagtacaagcgcgtccgcttcaagggcatcatctgcgagcgctgtggcgtc
gaggtgactcgcgccaaggtgcgtcgtgagcgcatgggccacatcgagctggccgccccg
gtcacccacatctggtacttcaagggtgtcccgtcgcggctgggctacctgctcgacctc
gcgccgaaggatctcgagaagatcatctacttcgccgcgtacgtgatcacggccgtcgac
gacgagctgcggcacaacgaactctccaccctcgaggcggagatggaggtcgagaagaag
accgtcgccgatcagcgcgacgccgacctcgaggcccgcgcccagaagctggaagccgac
ctggccgagctggaggccgagggcgccaagtccgacgtccgccgcaaggtcaaggacggc
ggcgagcgcgagatgcgtcagctgcgcgaccgcgcccagcgggagctggaccggctcgac
gagatctggaccaccttcaccaagctgtcgcccaagcagctgatcgtggacgaggtcctc
taccgcgagctgcaggaccgctacggcgaatacttcacgggcgcaatgggtgccgaggcg
atccagaagctcatggagaccttcgacatcgacgccgaggccgagaacctgcgcgagacc
attcgtacgggcaagggccagaagaagcttcgcgcgctgaagcgtctgaaggtcgtcgcc
gcgttccagaccaacggcaactcgccgatgggcatggtcctcgacgccgtgccggtgatc
ccgccggagctgcgcccgatggtgcagctggacggtggccgcttcgcgacctccgacctc
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgtttgaagcgactgatcgatctg
ggtgcgcccgagatcatcgtgaacaacgagaagcgcatgctgcaggagtcggtggacgcg
ctgttcgacaacggccgtcgcggccgtccggtcaccggtccgggtaaccgcccgctgaag
tcgctgagcgatctgctcaagggcaagcagggtcgtttccgtcagaacctgctcggcaag
cgtgtcgactactccggccgttcggtcatcgtggtcggtccgcagctcaagctgcaccag
tgcggtctgccgaagctgatggcgctcgagctgttcaagccgttcgtcatgaagcgtctg
gtcgacctgaaccacgcgcagaacatcaagtccgccaagcggatggtcgagcgtcagcgt
ccccaggtgtgggatgtcctcgaagaggtcatcgccgagcacccggtgctgctgaaccgc
gcgcccaccctgcaccgcctgggtatccaggccttcgagccgctgctggtcgaaggcaag
gccatccagctgcacccgctggtgtgtgaggcgttcaacgccgacttcgacggtgaccag
atggccgtgcacctgccgctgtcggcggaggcgcaggccgaggcccgcatcctgatgctg
tcctcgaacaacatcctgtcgccggcgtcgggtcgtccgctcgccatgccgcgtctggac
atggtgaccggtctgtactacctgacccgcctggaagagggcgcgaagggcgagtaccgg
gcggccaccaaggacgaggccgagttcggcgtctactcctcgcccgccgaggcgcagatg
gccgtcgaccgcggcgagctgaccgtgcgcaccctgatcaagctgcgcctgaccgatcag
cgtccgcccaaggacgtcgaggccgagctgttcccgaacggctggcagcgcggcgacgcg
tggaccaccaagaccacgctgggccgggtgctgttcaacgatctgctcccggcggactac
gcgttcatcgacgagccgatgccgaagaagcgtcaggccgcgatcatcaacgatctggcc
gagcgctacccgatgatcgtggtcgcgcagaccgtcgacaagctcaaggacgcgggcttc
tactgggccacccgttccggcgtcacggtctccatgtcggacgtgctcgtgccgaccgag
aaggccgagatcatggcgcgttacgacgcgcaggccgatcagatcgagaagaagtaccag
cgtggtgctctggaccaccaggagcgcaacaacgccctggtcaagatctggcaggaagcg
accgaagaggtcggtaaggcgctgcgcgcgcactacccgccggacaacccgatcatcacg
atcgtcgactccggcgcgacgggtaacttcacccagactcgtaccctcgcgggcatgaag
ggtctggtgaccaacccgaagggtgagttcatcccgcagccgatcaagtcctccttccgt
gagggcctgacggttctggagtacttcatcaacacccacggtgcgcgaaagggtctggcc
gacaccgcgcttcgcaccgccgactcgggttacctgacccgtcgtctggtggacgtgtcg
caggacgtcatcgtgcgcgagaccgactgtggcaccgagcgcggcatcgtggtgccgatc
gcggagaagcagcccgacgggtcgctcatccgggacgcccacgtggagaccagcaccttc
gctcggacgctggccaccgacgcgctcgacgccaagggcaacgtcatcatcgagaagggt
cacgatctcggcgacccggctctcgaggcgctgctcgacgccggcatcaccgaggtgaag
gtccgctccgtgctgacctgcaccaccggcaccggcgtgtgcgccacctgctacggccgc
tcgatggcgaccggcaagctggtggacatcggtgaggccgtcggtatcgtcgccgcccag
tccatcggtgagcccggtacccagctgaccatgcgcaccttccaccagggtggtgtcgcc
ggtgacgacatcacgggtggtctgccccgcgtgcaggagctgttcgaggctcgtgtgccc
aagggcaaggcccccatcgccgaggtgtcgggtcgcgtgcggctcgaggacgacgaccgc
ttctacaagatcacgatcatcccggacgacgggtcggacgaggtcctgtacgacaagctg
tcgaagcgtcagcgcctgcgggtgttcaagcacgaggacggctccgagcgtctgctggcc
gacggtgaccacgtcgaggtcgggcagcagctgctcgagggctcggccgatccgcacgag
gtgctgcgcgtgatgggtccgcgtcaggtgcaggtccacctggtccacgaggtccaggag
gtgtaccgctcgcagggtgtgtccatccacgacaagcacatcgaggtgatcgtccgccag
atgctgcgccgcgtcaccatcatcgattcgggtgcgaccgagttcctcccgggttcgctg
gtggagcgcgccgagttcgagtcctcgaaccgtcgcgtggtcgcggagggcggcgagcct
gcctcgggtcgcccggtgctgatgggtatcaccaaggcgtcgctggccacggactcgtgg
ctgtcggcggcctccttccaggagacgactcgtgtcttgacggacgcggccatcaactgc
cgctccgacaagctgatcggcctgaaggagaacgtcatcatcggtaagctgatccccgcc
ggtaccggtatcaaccgctaccgcaacatccaggttcagcccaccgaagaggcgcgccag
gcggcgtacgctgtcccgtcctacgacgacagctactacagcccggacggcttcggcacc
tccaccggtgccgcggtcccgctggacgactacggcttcagcgactaccgctga
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