Nocardia yunnanensis: D7D52_08465
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Entry
D7D52_08465 CDS
T09774
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nyu
Nocardia yunnanensis
Pathway
nyu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
D7D52_08465 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nyu03400
]
D7D52_08465 (recD)
Enzymes [BR:
nyu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
D7D52_08465 (recD)
DNA repair and recombination proteins [BR:
nyu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
D7D52_08465 (recD)
BRITE hierarchy
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
UvrD-helicase
Viral_helicase1
Helicase_RecD
AAA_22
SH3_13
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AYF73891
UniProt:
A0A386Z891
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All DBs
Position
1851897..1853789
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AA seq
630 aa
AA seq
DB search
MTGIQLAQRGTGMLAVFNNAGVLSAADVHVALRLARLGGERSEAVVFATALAVRAVRSGS
VCLEVRRMHEIGVDAEGTEESAIDPATLPWPPVDSVIAALRVSPLVTGSPAGPLRPLRLI
DPPGGADAGPLLYLDRYYRQEETIRRVLTERAASHPMVDAELVARELDRLFPDTAGPGEP
PDRQRLAAALAATQWTTVVAGGPGTGKTHTIARVLALLVAHQQAIPDAPALRIALAAPTG
KAAARMQESVREQAGDIGLPELTAATLHRLLGWQRGGAGRFKHNEFNRLPYDVIVVDETS
MVSLTMMSRLLPAVRPDARLVLVGDPDQLASVDAGAVLADLVAGPVPGQANPALDRILGG
DLRATAAHPDALSGRERERLRGGIVRLTRGRRFGGRIAELAVAIRAGDADAALALLADGG
EELSLYAPDDIAEVRADVLCAARDATDAALAGDARAALTALESHRLLCAHRQGPYGVERW
DRLAAGWVTAAGITAEPGAAHWYPGQPLLVTANDHEARIYNGDTGVIVRMPDGTLRAALQ
RGTDPYLVHPTQFPGVTTVYAMTIHRSQGSQYNTVSVILPGPESTLLTRELLYTAVTRAR
RHVRILGTEAAIRSAIDRRVLRASGLRNRE
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgggattcagttggcgcagcggggaaccgggatgctggcggtgttcaacaacgcc
ggggtgctctcggccgcggacgtgcacgtggcgttgcggttggcgcggctgggcggggaa
cgctcggaggcggtcgtgttcgcgaccgcgctggcggtgcgggcggtgcgctcgggatcg
gtgtgcctggaagtgcggcgcatgcacgagatcggggtggacgccgagggtaccgaggaa
tcggccatcgacccggccacgctgccatggccgccggtcgactccgtcatcgccgccttg
cgcgtcagcccgctggtgaccggcagtcccgccgggccgctacggccgctgcggctgatc
gacccgcccggcggcgcggacgccgggccgctgctctacctcgaccggtattaccggcag
gaggagaccattcgccgggtgctcaccgagcgggccgccagccacccgatggtcgacgcg
gaactcgttgcgcgcgaactggatcggctcttccccgacaccgccgggccgggcgagccg
cccgaccggcagcggctggcggccgcgctggccgccacccagtggaccaccgtcgtcgcg
ggcggccccggtaccggcaagacccacaccatcgcccgggtgctggcgctgctggtcgcg
catcagcaggccataccggacgcgcccgccctgcgcatcgcgctggccgccccgaccggc
aaggcggccgcacgcatgcaggaatccgtgcgcgagcaggccggcgacatcgggctgccc
gaactcaccgccgccaccctgcatcggctgctgggctggcagcgcggcggggcggggcgg
ttcaagcacaacgagttcaaccggctgccctacgacgtgatcgtggtggacgagacctcc
atggtgtcgttgaccatgatgagccggctgctgcccgccgtccgccccgacgcccggctg
gtgctggtcggcgaccccgaccagctggcctcggtcgacgcgggcgcggtgctcgccgac
ctggtcgcgggacccgttccgggacaggcgaatccggcgctggaccggattctcggcggg
gatctgcgcgccaccgccgcccatcccgacgccctctccgggcgcgaacgcgaacggttg
cgcggcgggatcgtgcgcttgacccgtgggcgtcgcttcggcgggcgcatcgccgaactg
gccgtcgccatccgcgccggagacgccgacgccgcgctcgcgctcttggcggacggcggt
gaggagctgtcgctgtacgcgcccgacgacatcgccgaggtgcgcgccgacgtcctgtgc
gccgcccgtgacgccaccgacgccgccctcgccggtgacgcgcgcgccgccctcaccgcc
ctcgaatcccaccgcctgctctgtgcccaccgccaaggcccctacggtgtcgagcgctgg
gatcggctggccgccggctgggtcaccgccgccggcatcaccgccgaacccggtgccgcc
cactggtatccgggccagccgctgctggtcaccgccaacgaccacgaggcccgcatctac
aacggcgacaccggcgtcatcgtccgcatgcccgacggcaccctgcgcgccgcccttcaa
cggggcaccgacccctacctcgtgcaccccacccagttccccggcgtcaccaccgtgtac
gccatgaccattcaccgcagccagggctcgcagtacaacaccgtctcggtcatcctcccc
ggccccgaatccaccctgctcacccgagagttgttgtacacggccgtcacccgagcccgt
cgccacgtccgcatcctcgggaccgaagccgccatccgctcggccatcgaccgccgagtc
ctgcgagccagcggcctccgcaaccgcgaatag
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