Nocardia yunnanensis: D7D52_19220
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Entry
D7D52_19220 CDS
T09774
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nyu
Nocardia yunnanensis
Pathway
nyu03030
DNA replication
nyu03430
Mismatch repair
nyu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D7D52_19220
03430 Mismatch repair
D7D52_19220
03440 Homologous recombination
D7D52_19220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nyu03032
]
D7D52_19220
03400 DNA repair and recombination proteins [BR:
nyu03400
]
D7D52_19220
Enzymes [BR:
nyu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D7D52_19220
DNA replication proteins [BR:
nyu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D7D52_19220
DNA repair and recombination proteins [BR:
nyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D7D52_19220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF655
Motif
Other DBs
NCBI-ProteinID:
AYF75627
UniProt:
A0A386ZE32
LinkDB
All DBs
Position
4099079..4102630
Genome browser
AA seq
1183 aa
AA seq
DB search
MSASSGSFVHLHNHTEYSMLDGAAKITPLFKEATRLGMTAVGMSDHGNMYGASEFYNSAK
KQGIKPIIGIEAYIAPESRFNTKRVLWGDPSQKSDDVSGSGSYTHMTMVAENATGLRNLF
KLSSLASIEGQLGKWARMDADIIAEHAEGIIATTGCPSGEVQTRLRLGHEREALEAAAKW
QEIFGPENFFLEVMDHGLSIERRVREGLLEVGKKLGIPPLATNDCHYVHEHDAGNHEALL
CIQTGKTLSDPTRFKFDGSGYYLKSAEEMRAIWDAEVPDACDNTVLIGERVQSYDDVWEH
RDRMPIFPVPEGETQASWLRKEVMRGLDRRFPNGVPAEYFTRADYEIGVINEMGFPAYFL
IVADLITYARSVGINVGPGRGSAAGSLVAYAMGITNIDPIPHGLLFERFLNPERVSMPDI
DIDFDDRRRGEMVRYATEKWGSDRVAQVITFGTIKTKAALKDSARVQFGQPGFAIADQIS
KALPPPIMAKDIPLSGIMDPEHERYKEAAEVRELINTNPDVNKIYETARGLEGLIRNAGV
HACAVIMSSEPLTDAIPVWKRAQDGAIITGWDYPSCEAIGLLKMDFLGLRNLTVIGDCLQ
NMKANRGIDLDLDTLPLEDTATYELLARGDTLGVFQLDGGAMRDLLRRMQPTGFEDIVAV
LALYRPGPMGMNAHNDYADRKNGRQEVKPIHPELEEPLKDILRDTYGLIVYQEQIMQIAQ
KVAGYSLGRADILRRAMGKKKASVLEAEFEGFEAGMLANGFTKPAIKALWDTILPFAGYA
FNKSHAAGYGLVSFWTAYLKANYPAEYMAGLLTSVGDDKDKAAVYLADCRRLGIQVLPPD
VNESELEFASVGNDIRFGMGAVRNVGANVVASIIQARKEKSKFTDFSDYLNKIDAIACTK
KVTESLIKAGAFDSLGHPRKGLMLVHSDAIDAVMSTKKAEAIGQFDLFGGLDEGDESIAS
VFNVKVPDEEWETKHKLALEREMLGLYVSGHPLNGVEHVLAAQSDTQIPAILEGDVKDGA
QVTIGGIFANVTRRVNKNGLPWASAQLEDLSGGIEVLFFPQSYSVYGMDVTEDAIVLVKA
RVSARDDRVSLIANDLVVPDLSSIGVDKPVSVVIPTRLCTPDKIGELKRVLNRHPGTADV
HIRHVGSRDRTTTLKVADNLRVSPSSALMGDLKALLGPGCLGS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagcctcgtcgggatcattcgtccatctccacaatcacaccgagtactcgatgctc
gacggcgcggcgaagatcacgcccttgttcaaagaggcgacccggctgggcatgaccgcc
gtcggcatgtccgaccacggcaatatgtacggcgcgtcggagttctacaactccgccaag
aagcagggcatcaagccgatcatcggcatcgaggcgtacatcgcgccggagtcccggttc
aacaccaagcgcgtgctgtggggtgacccgtcgcagaagagcgacgacgtctccggttcg
ggttcctacacccacatgaccatggtcgccgagaacgcgaccggtctgcgcaatctgttc
aagctgtcgagcctggcctcgatcgagggtcagctcggcaagtgggcgcgcatggacgcc
gacatcatcgccgagcacgccgagggcatcatcgccaccaccggctgcccgtcgggcgag
gtgcagacccggttgcggctgggccacgagcgcgaggcgctcgaggcggcggccaagtgg
caggagatcttcgggccggagaatttcttcctcgaggtgatggatcacggcctgtccatc
gaacgccgggtgcgcgagggcctgctcgaggtcggcaagaagctgggcattccgccgctg
gccaccaacgactgccactacgtgcacgagcacgacgcgggcaatcacgaagcgctgctg
tgcattcagaccggcaagacgctctcggatccgacccgcttcaagttcgacggctccggc
tactacctcaagtccgccgaggagatgcgcgcgatctgggacgcggaggtccccgacgcc
tgcgacaacaccgtgctgatcggtgagcgcgtgcagtcctacgacgacgtgtgggagcac
cgcgaccggatgccgatcttcccggtgcccgagggcgagacccaggccagctggctgcgc
aaggaggtcatgcgcggcctggaccggcgtttccccaacggcgttccggccgaatacttc
acgcgcgccgactacgagatcggcgtcatcaacgagatgggcttcccggcctacttcctc
atcgtcgccgatctcatcacctacgcgcgctcggtcggcatcaatgtcggtccgggccgt
ggttcggcggccggctcgctggtcgcctacgccatgggcatcacgaacatcgacccgatt
ccgcacggtctgctgttcgagcgcttcctcaatcccgagcgcgtgtccatgcccgatatc
gatatcgacttcgacgatcgccgccgcggtgagatggtccgctacgccaccgagaagtgg
ggcagcgaccgcgtcgcccaggtgatcaccttcggtacgattaaaaccaaagcggcgctg
aaggattcggcccgcgtgcagttcggccagcccgggttcgccatcgccgatcagatctcc
aaggcgctgccgccgccgatcatggccaaggacattccgctctcgggcatcatggatccc
gagcacgagcggtacaaggaagccgccgaggttcgtgagctcatcaatacgaatccggac
gtcaacaagatctacgagaccgcgcgcggcctggaaggtctgatccgcaacgccggtgtg
cacgcgtgcgcggtgatcatgtcctccgagccgctgaccgatgccatcccggtgtggaag
cgcgcgcaggacggcgccatcatcaccggctgggactatccgtcgtgtgaggccatcggc
ctgttgaagatggacttcctgggtctgcgcaacctcaccgtcatcggtgactgcctgcag
aacatgaaggccaaccgcggcatcgacctggatctggacacgctgccgctggaagacacc
gccacctacgaattgctcgcgcgcggtgacactctcggcgtgttccagctcgacggcggc
gccatgcgcgatctgctgcgccgcatgcagcccaccggcttcgaggacatcgtcgccgtg
ctcgcgctgtatcgcccgggtccgatgggcatgaacgcccacaacgactacgccgaccgc
aagaacgggcggcaagaggtcaagccgattcaccccgaattggaagagccgctcaaagac
atcctgcgtgatacctacggcctgatcgtgtatcaggagcagatcatgcagatcgcgcag
aaggtcgcaggctactcgctgggtcgagccgatattctgcgccgcgccatgggcaagaag
aaggcgtccgtgctggaggccgaattcgagggcttcgaagcgggcatgctggccaacggc
ttcaccaagcccgccatcaaggccctgtgggacaccattcttccgttcgccggctacgcg
ttcaacaaatcgcatgccgccggctacggtctggtgtcgttctggaccgcctacctcaag
gccaactatcccgccgagtacatggccggtctgctcacctccgtcggtgacgacaaggac
aaggccgccgtctacctggccgactgccgccgcctgggcatccaggtgttgccgcccgac
gtcaacgagtccgaactcgaattcgcctcggtgggcaacgacattcgcttcggcatgggc
gcggtgcgcaatgtcggcgcgaacgtggtggcctcgatcattcaggcgcgcaaggagaag
tcgaagttcaccgacttctccgactacctcaacaagatcgacgccatcgcctgcaccaag
aaggtcaccgaatccctcatcaaggcaggcgctttcgactcgctcgggcatccgcgcaag
ggcctgatgctggtgcactccgatgccatcgacgcggtcatgtcgaccaagaaggccgag
gccatcggccagttcgacctgttcggcggcctcgacgagggcgacgagtcgatcgccagc
gtcttcaatgtgaaggtccccgacgaggagtgggagaccaagcacaagctcgccctggag
cgggagatgctgggcctgtacgtgtccgggcatccgctcaacggcgtcgagcacgtgctg
gccgcccagtccgacacccagatcccggccattctcgagggcgacgtcaaggacggcgcg
caggtcaccatcggcggcatcttcgccaatgtgacccggcgcgtgaacaagaacggcctg
ccgtgggcgtcggcgcagctcgaggatctcagcggcggcatcgaggtgctgttcttcccg
cagtcctactcggtgtacggcatggacgtcaccgaggacgccatcgtgctggtgaaggct
cgggtcagcgctcgcgacgaccgcgtctcgctcatcgccaacgaccttgtggtgccggat
ctttcgtcgatcggcgtggacaagccggtctcggtggtgatcccgacccggctgtgcacg
cccgacaagatcggtgagctcaagcgggtgctcaaccgccatccgggcaccgcggacgtg
cacatccgccatgtcggctcccgtgatcgcaccaccaccctcaaagtggccgacaatctg
cgggtttcgccgtcctcggcgctcatgggcgacctcaaggcgctgctcggtccgggctgc
ctgggcagctga
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