Nocardia yunnanensis: D7D52_22195
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Entry
D7D52_22195 CDS
T09774
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nyu
Nocardia yunnanensis
Pathway
nyu03030
DNA replication
nyu03410
Base excision repair
nyu03420
Nucleotide excision repair
nyu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nyu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D7D52_22195 (polA)
03410 Base excision repair
D7D52_22195 (polA)
03420 Nucleotide excision repair
D7D52_22195 (polA)
03440 Homologous recombination
D7D52_22195 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nyu03032
]
D7D52_22195 (polA)
03400 DNA repair and recombination proteins [BR:
nyu03400
]
D7D52_22195 (polA)
Enzymes [BR:
nyu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D7D52_22195 (polA)
DNA replication proteins [BR:
nyu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D7D52_22195 (polA)
DNA repair and recombination proteins [BR:
nyu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D7D52_22195 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D7D52_22195 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH_2
LAMTOR
Motif
Other DBs
NCBI-ProteinID:
AYF76098
UniProt:
A0A386ZF07
LinkDB
All DBs
Position
4719757..4722522
Genome browser
AA seq
921 aa
AA seq
DB search
MSVGIPRLCRVTPASTEQRPVVSASATGEQQPTLLLLDGHSLAYRAFFALPAENFKTQSG
QTTNAVYGFTAMLINLLRDEKPTHVAAAFDVSRKTFRTEAYPEYKANRSTTPDEFKGQVE
TTQEVLGALGIPVMAIDGYEADDVIATLTTQAVPHGFKVLIVTGDRDALQLVSDDVTVLY
PKKGVSELTRFTPAAVEEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTAAKWIREYG
DLAALVDQVDKVKGKVGDALRANLSSVVLNRQLTEMVKEVPLPYTPDQLAMQPWDRDKIH
RLFDELEFRVLRDRLFDTLAPVEPEAESGFEISGSALAAGAVADWLAEHAKAGVRHGVSV
VGNGAPIHGDAQAIALAAADGEGAYIDVHTLTPEDEQALGAWLADPETPKALHEAKTAMH
ALRGRGWQLGGLTSDTALAAYLILPGQRTFNLEDLSLRYLSRELRVDNAGAAQLSLLDDE
EQVDAEVANAQMLRARAVFDLADAFDAELERIESTALLRDMELPLLSVLAELEAAGIAVD
SAQLEELQREFADRVAEAANAAYEVIGKQINLGSPKQLQVVLFDELDMPKTKRTKTGYTT
DADALEGLYEKTQHPFLQHLLEHRDATRLKVTVDGLLKSVADDGRIHTTFNQTVAATGRL
SSTEPNLQNIPIRTDMGRRIRDTFVVGPGAESLMTADYSQIEMRIMAHLSKDAGLIEAFN
SGEDLHNFVASKAFDIPISAVDPELRRRIKAMSYGLAYGLSAYGLSQQLKISAEEAKVQM
DVYFNRFGAIRDYLRDAVEQARKTGYTETLFGRRRYLPDLDSSNRQRREAAERMALNAPI
QGTAADIIKVAMIDTQHAIRDAGLKSRMLLQIHDELVFEVAPGEREQLESLAREHMSQAI
ELSVPLEVSVGVGRSWDSAAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggggatacctagactctgtcgggtgacccctgcctctaccgaacagcgtcct
gtcgtgtccgcgtccgccaccggtgagcagcagccgaccctgctgttgctggatgggcat
tcgctggcctatcgcgcgttcttcgcgctgcccgcggagaacttcaagacgcagagcggg
cagaccaccaatgcggtgtacgggttcacggcgatgctgatcaacctgttgcgcgacgag
aagccgacgcatgtggcggcggcgttcgacgtgagccgcaaaacgttccggaccgaggcg
tatccggagtacaaggcgaatcgctcgaccacgccggacgagttcaaggggcaggtggag
accacccaggaagtgctgggggcgctcggcattccggtcatggcgatcgacgggtacgag
gcggacgatgtgatcgccaccctcaccacccaggcggtgccgcacgggttcaaggtcctc
atcgtcaccggcgaccgggacgcgctgcagctggtcagcgatgacgtgaccgtgctctac
ccgaagaagggcgtctccgagctgacccggttcaccccggcggcggtggaggagaagtac
gggctcaccccgcagcagtacccggacttcgcggcgctgcgcggcgacccgagcgacaat
ctgcccggcatccccggcgtgggggagaagacggcggccaagtggatccgcgagtacggg
gatctggccgcgctggtcgatcaggtggacaaggtcaagggcaaggtcggagacgcgttg
cgcgccaacctgtccagcgtcgtgctcaaccggcagctcaccgagatggtcaaggaggtg
ccgctgccgtacacgccggatcagctggccatgcagccgtgggatcgcgacaagatccac
cggctgttcgacgagctggagttccgcgtgctgcgcgaccggctgttcgacacgctggcg
cccgtggagcccgaggccgagtccgggttcgagatcagcgggagcgcgctggccgccggc
gccgtcgccgactggctcgccgagcacgcgaaagcgggtgtgcggcacggtgtttccgtc
gtcggcaacggcgcgccgatccacggtgacgcccaggccatcgccttggccgccgccgac
ggcgagggcgcctacatcgacgtgcacaccctgacccccgaggacgagcaggcgctgggc
gcctggctcgccgacccggagaccccgaaggcgttgcacgaggccaagaccgccatgcac
gcgctgcgcgggcgtggctggcagctgggcgggctcaccagtgacaccgcgctggcggcg
tatctgatcctgccggggcagcgcaccttcaacctggaggatctgtcgctgcgctacctg
agccgggagctgcgcgtcgacaatgccggtgcggcccagttgtcgctgctcgacgacgag
gagcaggtcgacgccgaggtcgccaatgcccagatgctgcgcgcccgtgcggttttcgat
ctcgccgacgccttcgacgccgagttggagcgcatcgagtccaccgcgttgctgcgggac
atggagctgccgctgctgagcgtgctggccgaactggaggccgcgggcatcgcggtcgac
tccgcgcaactggaggaattgcagcgcgagttcgcagaccgggtcgccgaagccgccaac
gccgcctacgaggtgatcggcaagcagatcaacctcggctcgcccaagcagctgcaggtg
gtgttgttcgacgagctcgacatgccgaagaccaagcgcaccaagaccggctacaccacc
gacgcggacgcgctcgagggcctctacgagaagacccagcacccgttcctgcagcatctg
ctcgagcatcgcgacgccacccggctgaaggtgaccgtcgacggcctgctcaagtcggtc
gccgacgacggccgcatccacaccaccttcaatcagacggtggcggccacgggccggctg
tcctcgaccgagccgaacctgcagaacattccgatccgcaccgatatgggccgccgcatt
cgcgacaccttcgtcgtgggccccggcgccgaatcgctcatgacggccgactacagccag
atcgaaatgcgcatcatggcccacctgtccaaggacgccggcctgatcgaggcgttcaac
tccggggaggacctgcacaatttcgtcgcctccaaggcgttcgacatccccatctccgcg
gtcgatccggaactgcgccgccgcatcaaggccatgtcctacggcctggcctacgggctg
tcggcctacggcctgtcgcagcagttgaagatcagcgccgaagaggcgaaggtccagatg
gacgtctacttcaaccgtttcggcgccatccgtgactacctgcgcgacgccgtcgagcag
gcccgcaagaccggctacaccgaaacgcttttcggccgccgccgctacctgcccgatctg
gactccagcaaccggcagcggcgcgaggcggcggaacgcatggcactcaacgcccccatt
cagggcaccgccgccgacatcatcaaggtcgccatgatcgacacccagcacgcgatccgc
gacgccggcctgaaatcccgcatgctgctgcagatccacgacgaactcgtcttcgaggtc
gcccccggtgagcgcgagcaactggaatcccttgcccgcgaacacatgtcccaggccatc
gagctctcggtgccgctggaggtctcggtcggcgtcggccgcagctgggactcggccgcc
cactga
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